RetrogeneDB ID: | retro_amel_345 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192393.1:2291785..2292255(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000009163 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.32 % |
Parental protein coverage: | 98.77 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MAKSKNHTTHNQ-SRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARA |
MAKSKNHTTHN..S.KW.R.G.KK..SQR.ES.KGV..KFLRN.....KHNKKGLKKMQANN.K.MS... | |
Retrocopy | MAKSKNHTTHNR<SQKWQRKGVKKHQSQRHESFKGVHTKFLRNFHNVEKHNKKGLKKMQANNTKGMSTHV |
Parental | EAIKALVKPKEVTPKIPKGGSRKLNRLAYIAHPKLGKRARARIAKGLRLC-GRSPRPRVKPR-PG-QSAT |
...KAL.K..EV.PK.PKG.S.KL..LAY....KL.K.A...IAKG.RLC....PRPR.KPR.PG...A. | |
Retrocopy | QPTKALLKS*EVKPKGPKGISHKLHQLAYTVQSKLRKHAHTHIAKGRRLC>SQRPRPRLKPR>PG>EAAA |
Parental | PAPARAPAPTAAQAPKGAQAPAKL |
.A....PAP....APKG....... | |
Retrocopy | LAAVLTPAP----APKGTHDTSRV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |