Parental gene: | RPS7, ENSG00000171863 |
| Aliases: | RPS7, DBA8, S7 |
| Description: | ribosomal protein S7 [Source:HGNC Symbol;Acc:10440] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:3622794..3628509(+) |
>ENSG00000171863
ATGTTCAGTTCGAGCGCCAAGATCGTGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCATCTCCCAGGCTCT
TCTGGAGCTGGAGATGAACTCGGACCTCAAGGCTCAGCTCAGGGAGCTGAATATTACGGCAGCTAAGGAAATTGAAGTTG
GTGGTGGTCGGAAAGCTATCATAATCTTTGTTCCCGTTCCTCAACTGAAATCTTTCCAGAAAATCCAAGTCCGGCTAGTA
CGCGAATTGGAGAAAAAGTTCAGTGGGAAGCATGTCGTCTTTATCGCTCAGAGGAGAATTCTGCCTAAGCCAACTCGAAA
AAGCCGTACAAAAAATAAGCAAAAGCGTCCCAGGAGCCGTACTCTGACAGCTGTGCACGATGCCATCCTTGAGGACTTGG
TCTTCCCAAGCGAAATTGTGGGCAAGAGAATCCGCGTCAAACTAGATGGCAGCCGGCTCATAAAGGTTCATTTGGACAAA
GCACAGCAGAACAATGTGGAACACAAGGTTGAAACTTTTTCTGGTGTCTATAAGAAGCTCACGGGCAAGGATGTTAATTT
TGAATTCCCAGAGTTTCAATTGTAA
ATGTTCAGTTCGAGCGCCAAGATCGTGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCATCTCCCAGGCTCT
TCTGGAGCTGGAGATGAACTCGGACCTCAAGGCTCAGCTCAGGGAGCTGAATATTACGGCAGCTAAGGAAATTGAAGTTG
GTGGTGGTCGGAAAGCTATCATAATCTTTGTTCCCGTTCCTCAACTGAAATCTTTCCAGAAAATCCAAGTCCGGCTAGTA
CGCGAATTGGAGAAAAAGTTCAGTGGGAAGCATGTCGTCTTTATCGCTCAGAGGAGAATTCTGCCTAAGCCAACTCGAAA
AAGCCGTACAAAAAATAAGCAAAAGCGTCCCAGGAGCCGTACTCTGACAGCTGTGCACGATGCCATCCTTGAGGACTTGG
TCTTCCCAAGCGAAATTGTGGGCAAGAGAATCCGCGTCAAACTAGATGGCAGCCGGCTCATAAAGGTTCATTTGGACAAA
GCACAGCAGAACAATGTGGAACACAAGGTTGAAACTTTTTCTGGTGTCTATAAGAAGCTCACGGGCAAGGATGTTAATTT
TGAATTCCCAGAGTTTCAATTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 209 .80 RPM |
| bodymap2_lung | 502 .62 RPM |
| bodymap2_breast | 167 .10 RPM |
| bodymap2_adipose | 175 .50 RPM |
| bodymap2_adrenal | 361 .59 RPM |
| bodymap2_skeletal_muscle | 151 .58 RPM |
| bodymap2_thyroid | 178 .44 RPM |
| bodymap2_prostate | 603 .61 RPM |
| bodymap2_colon | 318 .25 RPM |
| bodymap2_testis | 215 .28 RPM |
| bodymap2_brain | 61 .53 RPM |
| bodymap2_heart | 125 .79 RPM |
| bodymap2_white_blood_cells | 583 .74 RPM |
| bodymap2_lymph_node | 539 .69 RPM |
| bodymap2_ovary | 308 .45 RPM |
| bodymap2_kidney | 187 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000015087 | ortholog_one2one | 11 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006121 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011870 | possible_ortholog | 7 retrogenes | |
| Monodelphis domestica | ENSMODG00000014495 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000061477 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008507 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028165 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025872 | possible_ortholog | 12 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008551 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_111 | 67.00 | 51.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_112 | 69.39 | 50.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_329 | 83.85 | 98.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_404 | 93.78 | 99.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_528 | 91.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_703 | 75.70 | 54.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_1242 | 97.42 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_hsap_1737 | 98.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_hsap_1837 | 96.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_hsap_2907 | 87.64 | 90.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_hsap_2925 | 80.17 | 61.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_hsap_3635 | 86.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_hsap_4711 | 85.45 | 56.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_hsap_4760 | 78.46 | 99.48 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000171863 retrocopies