RetrogeneDB ID: | retro_lafr_319 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_12:5731861..5732374(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS7 | ||
Ensembl ID: | ENSLAFG00000015087 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.25 % |
Parental protein coverage: | 89.69 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK |
SGISQ.L.EL.MNSDLK..LRELN.T.AKEIEV.GG.KAIIIFV....LKSFQKIQVRLVRE.EKKFSGK | |
Retrocopy | SGISQVLPELGMNSDLKTPLRELNRTTAKEIEVVGGWKAIIIFVLI--LKSFQKIQVRLVREQEKKFSGK |
Parental | HVVFIAQRRILPKPTRK-SRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIR-VKLDGSRLIKVHL |
HVVFIAQR.ILPKPTRK.S.TKNKQK.PR..T.TA.HDA.LEDLVFPSEIVG.R...V.LDG..L.KV.L | |
Retrocopy | HVVFIAQR-ILPKPTRK>SHTKNKQKHPRNCTQTAMHDAVLEDLVFPSEIVGNRTP<VTLDGNWLRKVLL |
Parental | DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL |
DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFP.FQL | |
Retrocopy | DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPGFQL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |