RetrogeneDB ID: | retro_lafr_318 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_12:4954602..4955028(-) | ||
Located in intron of: | ENSLAFG00000015768 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS7 | ||
Ensembl ID: | ENSLAFG00000015087 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.87 % |
Parental protein coverage: | 73.2 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPT |
LKAQ.RE.N.T.AKEIEVGGGRKA..IFV.VPQLKSFQKIQ.RLV..LEKKFSGKH.VFIAQ.RILPKPT | |
Retrocopy | LKAQMREPNRTTAKEIEVGGGRKAVTIFVLVPQLKSFQKIQLRLVGDLEKKFSGKHIVFIAQGRILPKPT |
Parental | RKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSG |
.KS.TKNK.K.PRS...TA.HDAI.ED.VFP.EIVGKRI.V.LDGS.L..VHL..AQQNNVEHKVETFSG | |
Retrocopy | *KSHTKNKHKHPRSCSETATHDAIREDWVFPGEIVGKRIPVTLDGSWLREVHLARAQQNNVEHKVETFSG |
Parental | VY |
VY | |
Retrocopy | VY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |