Parental gene:

MMU.1104, ENSMMUG00000003432

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:3:140739235..140756424(+)


>ENSMMUG00000003432
ATGCCGGATTACCTCGGTGCCGATCAGCGGAAGACCAAAGAGGATGAGAAGGACGACAAGCCCATCCGAGCTCTGGATGA
GGGGGATATTGCCTTGCTAAAAACTTATGGTCAGAGCACTTACTCTAGGCAGATCAAGCAAGTTGAAGATGACATTCAGC
AACTTCTCAAGAAAATTAATGAGCTCACTGGTATTAAAGAATCTGACACTGGCCTGGCCCCACCAGCACTCTGGGATTTG
GCTGCAGATAAGCAGACACTCCAGAGTGAACAGCCTTTACAGGTTGCCAGGTGTACAAAGATAATCAATGCTGATTCGGA
GGACCCAAAATACATTATCAACGTAAAGCAGTTTGCCAAGTTTGTGGTGGACCTTAGTGATCAAGTGGCACCTACTGACA
TTGAAGAAGGGATGAGAGTGGGTGTGGACAGAAATAAATATCAAATTCACATTCCATTGCCTCCTAAGATTGACCCAACA
GTTACCATGATGCAGGTGGAAGAGAAACCTGATGTCACATACAGTGATGTTGGTGGCTGTAAGGAACAGATTGAGAAATT
GCGAGAAGTAGTTGAAACCCCATTACTTCAT

Library Parental gene expression (RPM)
SRP007412_brain 29 .58 RPM
SRP007412_brain_prefrontal_cortex 20 .63 RPM
SRP007412_cerebellum 30 .29 RPM
SRP007412_heart 23 .26 RPM
SRP007412_kidney 27 .46 RPM
SRP007412_liver 25 .97 RPM
SRP007412_testis 38 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000005729 ortholog_one2one 1 retrogene
retro_etel_1316,
Homo sapiens ENSG00000161057 ortholog_one2one 2 retrogenes
retro_hsap_2705, retro_hsap_3980,
Gorilla gorilla ENSGGOG00000009167 ortholog_one2one 3 retrogenes
retro_ggor_1885, retro_ggor_2672, retro_ggor_2673,
Myotis lucifugus ENSMLUG00000008853 ortholog_one2one 1 retrogene
retro_mluc_1642,
Monodelphis domestica ENSMODG00000017238 ortholog_one2one 1 retrogene
retro_mdom_868,
Mustela putorius furo ENSMPUG00000018268 ortholog_one2one 3 retrogenes
retro_mputfur_1025, retro_mputfur_232, retro_mputfur_387,
Nomascus leucogenys ENSNLEG00000009274 ortholog_one2one 2 retrogenes
retro_nleu_1578, retro_nleu_2042,
Otolemur garnettii ENSOGAG00000005164 ortholog_one2one 2 retrogenes
retro_ogar_2198, retro_ogar_2309,
Pongo abelii ENSPPYG00000017883 ortholog_one2one 2 retrogenes
retro_pabe_2257, retro_pabe_2412,
Pan troglodytes ENSPTRG00000019553 ortholog_one2one 2 retrogenes
retro_ptro_1826, retro_ptro_2702,
Tarsius syrichta ENSTSYG00000000666 ortholog_one2one 4 retrogenes
retro_tsyr_1031, retro_tsyr_1272, retro_tsyr_1857, retro_tsyr_2178,
Vicugna pacos ENSVPAG00000008921 ortholog_one2one 1 retrogene
retro_vpac_44,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1538 88.96 78.17
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2. retro_mmul_2299 67.20 63.45
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Download FASTA sequences of all ENSMMUG00000003432 retrocopies