Parental gene: | PSMC2, ENSPPYG00000017883 |
| Aliases: | None |
| Description: | 26S protease regulatory subunit 7 [Source:RefSeq peptide;Acc:NP_001126144] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 7:100027937..100049676(+) |
>ENSPPYG00000017883
ATGCCGGATTACCTCGGTGCCGATCAGCGGAAGACCAAAGAGGATGAGAAGGACGACAAGCCCATCCGAGCTCTGGATGA
GGGGGATATTGCCTTGTTGAAAACTTATGGTCAGAGCACTTACTCTAGGCAGATCAAGCAAGTTGAAGATGACATTCAGC
AACTTCTCAAGAAAATTAATGAGCTCACTGGTATTAAAGAATCTGACACTGGCCTGGCCCCACCAGCACTCTGGGATTTG
GCTGCAGATAAGCAGACACTCCAGAGTGAACAGCCTTTACAGGTTGCCAGGTGTACAAAGATAATCAATGCTGATTCGGA
GGACCCAAAATACATTATCAATGTAAAGCAGTTTGCCAAGTTTGTGGTGGACCTTAGTGATCAGGTGGCACCTACTGACA
TTGAAGAAGGGATGAGAGTGGGTGTGGATAGAAATAAATATCAAATTCACATTCCATTGCCTCCTAAGATTGACCCAACA
GTTACCATGATGCAGGTGGAAGAGAAACCTGATGTCACATACAGTGATGTTGGTGGCTGTAAGGAACAGATTGAGAAACT
GCGAGAAGTAGTTGAAACCCCATTACTTCATCCAGAGAGGTTTGTGAACCTTGGCATTGAGCCTCCCAAGGGCGTGCTGC
TCTTTGGTCCACCCGGTACAGGCAAGACACTCTGTGCACGGGCAGTTGCTAATCGGACTGATGCGTGCTTCATTCGAGTT
ATTGGATCTGAGCTTGTACAGAAATACGTCGGTGAGGGGGCTCGAATGGTTCGTGAACTCTTTGAAATGGCCAGAACAAA
AAAAGCCTGCCTTATCTTCTTTGATGAAATTGATGCTATTGGAGGGGCTCGTTTTGATGATGGTGCTGGAGGTGACAATG
AAGTGCAGAGAACAATGTTGGAACTGATCAATCAGCTTGATGGTTTTGATCCTCGAGGCAATATTAAAGTGCTGATGGCC
ACTAACAGACCTGATACTTTGGATCCAGCACTGATGAGGCCAGGGAGATTGGATAGAAAAATTGAATTTAGCTTGCCCGA
TCTAGAGGGTCGGACCCACATATTTAAGATTCACGCTCGTTCAATGAGTGTTGAAAGAGATATCAGATTTGAATTGTTAG
CACGACTGTGTCCAAATAGCACTGGTGCTGAGATTAGAAGTGTCTGCACAGAGGCTGGTATGTTTGCCATCAGAGCACGG
CGAAAAATCGCTACCGAGAAGGATTTCTTGGAAGCTGTAAATAAGGTCATTAAGTCTTATGCCAAATTCAGTGCTACTCC
TCGTTACATGACATACAACTGA
ATGCCGGATTACCTCGGTGCCGATCAGCGGAAGACCAAAGAGGATGAGAAGGACGACAAGCCCATCCGAGCTCTGGATGA
GGGGGATATTGCCTTGTTGAAAACTTATGGTCAGAGCACTTACTCTAGGCAGATCAAGCAAGTTGAAGATGACATTCAGC
AACTTCTCAAGAAAATTAATGAGCTCACTGGTATTAAAGAATCTGACACTGGCCTGGCCCCACCAGCACTCTGGGATTTG
GCTGCAGATAAGCAGACACTCCAGAGTGAACAGCCTTTACAGGTTGCCAGGTGTACAAAGATAATCAATGCTGATTCGGA
GGACCCAAAATACATTATCAATGTAAAGCAGTTTGCCAAGTTTGTGGTGGACCTTAGTGATCAGGTGGCACCTACTGACA
TTGAAGAAGGGATGAGAGTGGGTGTGGATAGAAATAAATATCAAATTCACATTCCATTGCCTCCTAAGATTGACCCAACA
GTTACCATGATGCAGGTGGAAGAGAAACCTGATGTCACATACAGTGATGTTGGTGGCTGTAAGGAACAGATTGAGAAACT
GCGAGAAGTAGTTGAAACCCCATTACTTCATCCAGAGAGGTTTGTGAACCTTGGCATTGAGCCTCCCAAGGGCGTGCTGC
TCTTTGGTCCACCCGGTACAGGCAAGACACTCTGTGCACGGGCAGTTGCTAATCGGACTGATGCGTGCTTCATTCGAGTT
ATTGGATCTGAGCTTGTACAGAAATACGTCGGTGAGGGGGCTCGAATGGTTCGTGAACTCTTTGAAATGGCCAGAACAAA
AAAAGCCTGCCTTATCTTCTTTGATGAAATTGATGCTATTGGAGGGGCTCGTTTTGATGATGGTGCTGGAGGTGACAATG
AAGTGCAGAGAACAATGTTGGAACTGATCAATCAGCTTGATGGTTTTGATCCTCGAGGCAATATTAAAGTGCTGATGGCC
ACTAACAGACCTGATACTTTGGATCCAGCACTGATGAGGCCAGGGAGATTGGATAGAAAAATTGAATTTAGCTTGCCCGA
TCTAGAGGGTCGGACCCACATATTTAAGATTCACGCTCGTTCAATGAGTGTTGAAAGAGATATCAGATTTGAATTGTTAG
CACGACTGTGTCCAAATAGCACTGGTGCTGAGATTAGAAGTGTCTGCACAGAGGCTGGTATGTTTGCCATCAGAGCACGG
CGAAAAATCGCTACCGAGAAGGATTTCTTGGAAGCTGTAAATAAGGTCATTAAGTCTTATGCCAAATTCAGTGCTACTCC
TCGTTACATGACATACAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 59 .77 RPM |
| SRP007412_cerebellum | 57 .15 RPM |
| SRP007412_heart | 39 .32 RPM |
| SRP007412_kidney | 56 .52 RPM |
| SRP007412_liver | 53 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000005729 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000161057 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000009167 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000008853 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003432 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000017238 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000018268 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009274 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005164 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000019553 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000666 | ortholog_one2one | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000008921 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2257 | 88.52 | 81.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2412 | 87.23 | 62.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000017883 retrocopies