Parental gene:

PSMC2, ENSVPAG00000008921

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Source:HGNC Symbol;Acc:9548]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_2280:374987..387924(+)


>ENSVPAG00000008921
ATGCCGGATTACCTCGGTGCGGATCAGCGGAAAACCAAAGAAGATGAAAAGGACGACAAACCCATCCGAGCTCTGGATGA
GGGGGATATCGCCTTGCTGAAAACTTACGGTCAGAGCACTTACTCTAGGCAGATCAAACAGGTTGAAGATGACATTCAGC
AACTTCTCAAGAAAATTAATGAGCTCACTGGTATCAAAGAGTCTGACACTGGCCTGGCCCCACCAGCACTCTGGGATTTG
GCTGCTGATAAGCAAACACTCCAGAGTGAACAGCCTTTGCAGGTTGCAAGATGTACAAAGATAATCAATGCTGATTCGGA
GGACCCAAAATACATTATCAATGTGAAGCAGTTTGCCAAGTTTGTGGTGGACCTCAGTGATCAGGTTGCACCTTATGACA
TGGAAGAAGGGATGAGAATTGGTGTGGACAGAAATAAGTATCAGATTCACATTCCACTGCCTCCTAAGATTGACCCAACA
GTTACCATGATGCAGGTGGAGGAAAAACCTGATGTTACATACAGTGATGTGGGTGGCTGTAAGGAACAGATTGAGAAACT
TCGAGAAGTAGTTGAAACCCCACTACTTCATCCAGAGAGGTTTGTTAACCTTGGCATTGAGCCTCCTAAGGGTGTGCTGC
TCTTTGGCCCACCGGGTACAGGCAAGACACTCTGTGCTCGGGCTGTTGCTAACAGGACTGATGCTTGCTTCATTCGAGTT
ATTGGATCTGAACTTGTGCAGAAGTATGTCGGTGAGGGGGCTCGAATGGTTCGGGAGCTCTTTGAAATGGCCCGAACAAA
GAAAGCCTGCCTTATCTTCTTTGATGAAATTGATGCTATTGGAGGGGCTCGTTTTGATGATGGTGCTGGAGGCGACAATG
AAGTGCAGAGGACGATGTTGGAACTGATCAATCAGCTGGATGGTTTTGATCCCCGAGGCAACATTAAAGTGCTCATGGCC
ACAAACCGGCCTGACACTCTGGACCCAGCACTGATGAGGCCGGGGAGATTGGACAGGAAGATTGAGTTTAGCCTACCTGA
TCTAGAGGGTCGGACTCATATTTTTAAGATTCATGCCCGCTCAATGAGTGTTGAAAGAGATATCAGATTTGAACTGTTAG
CACGACTGTGTCCAAATAGCACTGGTGCTGAGATCAGAAGTGTCTGCACAGAAGCTGGTATGTTTGCCATCAGAGCACGG
CGAAAAATTGCTACTGAGAAGGATTTCTTGGAAGCTGTAAATAAGGTCATTAAGTCCTATGCCAAATTCAGTGCTACTCC
GCGCTATATGACATACAACTGA

Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000005729 ortholog_one2one 1 retrogene
retro_etel_1316,
Homo sapiens ENSG00000161057 ortholog_one2one 2 retrogenes
retro_hsap_2705, retro_hsap_3980,
Gorilla gorilla ENSGGOG00000009167 ortholog_one2one 3 retrogenes
retro_ggor_1885, retro_ggor_2672, retro_ggor_2673,
Myotis lucifugus ENSMLUG00000008853 ortholog_one2one 1 retrogene
retro_mluc_1642,
Macaca mulatta ENSMMUG00000003432 ortholog_one2one 2 retrogenes
retro_mmul_1538, retro_mmul_2299,
Monodelphis domestica ENSMODG00000017238 ortholog_one2one 1 retrogene
retro_mdom_868,
Mustela putorius furo ENSMPUG00000018268 ortholog_one2one 3 retrogenes
retro_mputfur_1025, retro_mputfur_232, retro_mputfur_387,
Nomascus leucogenys ENSNLEG00000009274 ortholog_one2one 2 retrogenes
retro_nleu_1578, retro_nleu_2042,
Otolemur garnettii ENSOGAG00000005164 ortholog_one2one 2 retrogenes
retro_ogar_2198, retro_ogar_2309,
Pongo abelii ENSPPYG00000017883 ortholog_one2one 2 retrogenes
retro_pabe_2257, retro_pabe_2412,
Pan troglodytes ENSPTRG00000019553 ortholog_one2one 2 retrogenes
retro_ptro_1826, retro_ptro_2702,
Tarsius syrichta ENSTSYG00000000666 ortholog_one2one 4 retrogenes
retro_tsyr_1031, retro_tsyr_1272, retro_tsyr_1857, retro_tsyr_2178,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_44 77.84 87.30
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Download FASTA sequences of all ENSVPAG00000008921 retrocopies