Parental gene: | RBBP4, ENSNLEG00000002805 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397394.1:1923726..1954996(+) |
>ENSNLEG00000002805
ATGGCCGACAAGGAAGCAGCCTTCGACGATGCGGTGGAAGAACGAGTGATCAACGAGGAATACAAAATATGGAAAAAGAA
CACCCCTTTTCTTTATGATTTGGTGATGACCCATGCTCTGGAGTGGCCCAGCCTAACTGCCCAGTGGCTTCCAGATGTAA
CCAGACCAGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGGACACACACATCGGATGAACAAAACCATCTTGTT
ATAGCCAGTGTGCAACTCCCTAATGATGATGCTCAGTTTGATGCGTCACACTACGACAGTGAGAAAGGAGAATTTGGAGG
TTTTGGTTCAGTTAGTGGAAAAATTGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTAAACAGGGCCCGTTACATGC
CCCAGAACCCTTGTATCATCGCAACAAAGACTCCTTCCAGTGATGTTCTTGTCTTTGACTATACAAAACATCCTTCTAAA
CCAGATCCTTCTGGAGAGTGCAACCCAGACTTGCGTCTCCGTGGACATCAGAAGGAAGGCTATGGGCTTTCTTGGAACCC
AAATCTCAGTGGGCACTTACTTAGTGCTTCAGATGACCACACCATCTGCCTGTGGGACATCAGTGCCGTTCCAAAGGAGG
GAAAAGTGGTAGATGCGAAGACCATCTTTACAGGGCATACGGCAGTAGTAGAAGATGTTTCCTGGCATCTACTCCATGAG
TCTCTGTTTGGGTCAGTTGCTGATGATCAGAAACTTATGATTTGGGATACTCGTTCAAACAATACTTCCAAACCAAGCCA
CTCAGTTGACGCTCACACTGCTGAAGTGAACTGCCTTTCTTTCAATCCTTATAGTGAGTTCATTCTTGCCACAGGATCAG
CTGACAAGACTGTTGCCTTGTGGGATCTGAGAAATCTGAAACTTAAGTTGCATTCCTTTGAGTCACATAAGGATGAAATA
TTCCAGGTTCAGTGGTCACCTCACAATGAGACTATTTTAGCTTCCAGTGGTACTGATCGCAGACTGAATGTCTGGGATTT
AAGTAAAATTGGAGAGGAACAATCCCCAGAAGATGCAGAAGACGGGCCACCAGAGTTGTTGTTTATTCATGGTGGTCATA
CTGCCAAGATATCTGATTTCTCCTGGAATCCCAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGACAATATCATGCAA
GTGTGGCAAATGGCAGAGAACATTTATAATGATGAAGACCCTGAAGGAAGCGTGGATCCAGAAGGACAAGGGTCCTAG
ATGGCCGACAAGGAAGCAGCCTTCGACGATGCGGTGGAAGAACGAGTGATCAACGAGGAATACAAAATATGGAAAAAGAA
CACCCCTTTTCTTTATGATTTGGTGATGACCCATGCTCTGGAGTGGCCCAGCCTAACTGCCCAGTGGCTTCCAGATGTAA
CCAGACCAGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGGACACACACATCGGATGAACAAAACCATCTTGTT
ATAGCCAGTGTGCAACTCCCTAATGATGATGCTCAGTTTGATGCGTCACACTACGACAGTGAGAAAGGAGAATTTGGAGG
TTTTGGTTCAGTTAGTGGAAAAATTGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTAAACAGGGCCCGTTACATGC
CCCAGAACCCTTGTATCATCGCAACAAAGACTCCTTCCAGTGATGTTCTTGTCTTTGACTATACAAAACATCCTTCTAAA
CCAGATCCTTCTGGAGAGTGCAACCCAGACTTGCGTCTCCGTGGACATCAGAAGGAAGGCTATGGGCTTTCTTGGAACCC
AAATCTCAGTGGGCACTTACTTAGTGCTTCAGATGACCACACCATCTGCCTGTGGGACATCAGTGCCGTTCCAAAGGAGG
GAAAAGTGGTAGATGCGAAGACCATCTTTACAGGGCATACGGCAGTAGTAGAAGATGTTTCCTGGCATCTACTCCATGAG
TCTCTGTTTGGGTCAGTTGCTGATGATCAGAAACTTATGATTTGGGATACTCGTTCAAACAATACTTCCAAACCAAGCCA
CTCAGTTGACGCTCACACTGCTGAAGTGAACTGCCTTTCTTTCAATCCTTATAGTGAGTTCATTCTTGCCACAGGATCAG
CTGACAAGACTGTTGCCTTGTGGGATCTGAGAAATCTGAAACTTAAGTTGCATTCCTTTGAGTCACATAAGGATGAAATA
TTCCAGGTTCAGTGGTCACCTCACAATGAGACTATTTTAGCTTCCAGTGGTACTGATCGCAGACTGAATGTCTGGGATTT
AAGTAAAATTGGAGAGGAACAATCCCCAGAAGATGCAGAAGACGGGCCACCAGAGTTGTTGTTTATTCATGGTGGTCATA
CTGCCAAGATATCTGATTTCTCCTGGAATCCCAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGACAATATCATGCAA
GTGTGGCAAATGGCAGAGAACATTTATAATGATGAAGACCCTGAAGGAAGCGTGGATCCAGAAGGACAAGGGTCCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005904 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000010527 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004066 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001021 | ortholog_one2one | 7 retrogenes | |
| Cavia porcellus | ENSCPOG00000015352 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000022784 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000020008 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000027017 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000162521 | ortholog_one2one | 6 retrogenes | |
| Macropus eugenii | ENSMEUG00000014379 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000749 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000009940 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015214 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000057236 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015420 | within_species_paralog | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000007189 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001588 | ortholog_one2one | 6 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000010981 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000021492 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010923 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012011 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_1061 | 88.56 | 55.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_1179 | 74.09 | 56.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_1194 | 88.64 | 74.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_1356 | 92.09 | 50.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_nleu_1379 | 96.37 | 84.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_nleu_2982 | 89.49 | 64.94 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000002805 retrocopies