RetrogeneDB ID: | retro_mluc_2275 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430170:877366..878010(-) | ||
Located in intron of: | ENSMLUG00000012823 | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000023337 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RBBP4 | ||
Ensembl ID: | ENSMLUG00000000749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.64 % |
Parental protein coverage: | 50.59 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 5 |
Parental | KTPSSDVLVFDYTKHPSKPDP-SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVP |
.T...DVLVFDYTKHPSKPDP.SGEC.PD..LRGHQKEGYG.SW.PNL.GH.LSASDD.TICLWDISA.P | |
Retrocopy | RTLACDVLVFDYTKHPSKPDP<SGECSPDMCLRGHQKEGYGFSWSPNLCGHFLSASDDYTICLWDISAFP |
Parental | KEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDT-RSNNTSKPSHS-VDAHTAEVNCL |
K.GKVVD.K.IF.GH.A.V.DVS.HL.HESLFGS.ADDQKLMIWDT..SNNTS......V....AEVN.L | |
Retrocopy | KYGKVVDVKPIFIGHLAGVGDVSRHLHHESLFGSFADDQKLMIWDT<CSNNTSRSDQA>VSGYSAEVNSL |
Parental | SFNPYSEFILATGSADKTV-ALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILASSGTDRRLNVWDL |
SF..Y..FILATGSAD.TV.A.WDLRNLKLKLHSFES..K.EIFQVQW..HNETILA.SGTD.RLN.W.. | |
Retrocopy | SFSSYNKFILATGSADMTV>AFWDLRNLKLKLHSFES<SKEEIFQVQWFSHNETILAFSGTDCRLNIWVF |
Parental | SKIGEEQSPE |
SKIGE....E | |
Retrocopy | SKIGEDAEDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |