RetrogeneDB ID: | retro_etel_811 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_167701:3006..3300(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000018820 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000007560 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 59.41 % |
Parental protein coverage: | 60.87 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MPSIKLQSSDGEIFE-VDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAIL-KKVIQWCT-HKDD |
MP..KLQSS.GEI.E..DV.I...S..IKT.LE.LG...E.DD..VP..NVN.AI..KKV.QW.T.HK.. | |
Retrocopy | MPFMKLQSSNGEISE<IDVDISNPSLPIKTILENLGINNEIDDS-VPPSNVNTAIF>KKVSQWGTNHKNG |
Parental | PPPPEDDENKEKRTDDIVWDQEFLKVDQGTL |
PPPP.D.E.K.......VWDQEF.KVDQGTL | |
Retrocopy | PPPPKDNETKKRTDGFFVWDQEFQKVDQGTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |