RetrogeneDB ID: | retro_etel_762 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_160991:2683..3102(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000011064 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000007560 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.65 % |
Parental protein coverage: | 85.71 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | SIKLQSSD-GEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTH-KDDPPP |
SIKLQ.SD.G..FEVDVEIAKQSVTI.TMLED.GMD.EGDDDPVPLPNVNAAI..KV.QWC.H.KD.PPP | |
Retrocopy | SIKLQNSD>GDVFEVDVEIAKQSVTINTMLEDFGMDYEGDDDPVPLPNVNAAIF*KVMQWCAHPKDGPPP |
Parental | PEDDENKEKR-TDDIVWDQE-FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFN |
PEDDENKEKR..D...WDQE.F.K......FELILAANYLDI.G..DVTCKTVAN.I..KTPEEI.KT.. | |
Retrocopy | PEDDENKEKRKNDNPIWDQE>FRKLTKEA-FELILAANYLDIEGMFDVTCKTVANVIEKKTPEEIHKTTL |
Parental | IK |
.K | |
Retrocopy | LK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |