RetrogeneDB ID: | retro_mputfur_1293 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897070.1:359976..360768(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSMPUG00000007139 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 95.08 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS |
M.V.KNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS | |
Retrocopy | MVVSKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS |
Parental | LADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV |
LADLQND.VAFRKFKLI.EDVQGKNCLTNFH.MDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL.LFCV | |
Retrocopy | LADLQNDQVAFRKFKLIIEDVQGKNCLTNFHDMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLHLFCV |
Parental | GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDV |
GFTKKRNNQI.KTSY.QHQQVRQIRKKMMEIMT.EVQTNDLKEVVNKLI.DSIGKDIEKACQSI.PLHDV | |
Retrocopy | GFTKKRNNQIQKTSYVQHQQVRQIRKKMMEIMT*EVQTNDLKEVVNKLILDSIGKDIEKACQSI*PLHDV |
Parental | FVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV |
FVRKVKMLKKPKFELGKLMELHGE.SSSGKATGDETGAKVERADGYEPPVQ.SV | |
Retrocopy | FVRKVKMLKKPKFELGKLMELHGESSSSGKATGDETGAKVERADGYEPPVQKSV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |