RetrogeneDB ID: | retro_mputfur_764 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896945.1:4131539..4131946(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSMPUG00000007139 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 51.89 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | IRNIGKTLVTRTQGTKIASDGLKGRVFEVSLAD-LQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDK |
I.N.GKTL.TRTQGTK.ASDGLKG.VFEV.LAD.L.N.EVA..K.KL.TE...GK.CLT.FHGMDL..DK | |
Retrocopy | IINTGKTLMTRTQGTKTASDGLKGSVFEVNLAD<LKNGEVAGGKLKLTTEGIWGKDCLTYFHGMDLICDK |
Parental | MCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQ |
MCS.VKKWQ..IEAHV.VKTT..YLL.L.C.GFTK..NNQI...SY..HQ...QI..K...IMT.E.Q | |
Retrocopy | MCSIVKKWQPTIEAHVNVKTTEDYLLHLLCAGFTKNCNNQIWNSSYT*HQHICQI-QKIK*IMTLEEQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |