RetrogeneDB ID: | retro_dord_142 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_3746:13372..13793(+) | ||
Located in intron of: | ENSDORG00000011790 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002250 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.89 % |
Parental protein coverage: | 52.85 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VGKNKRLT-GGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLA |
VGK.K.LT.G.KKGAKKKV.DPFSKK.WY..KAPAMFNIRNIGKTLV.RTQGTKI....L.G.VFEVSLA | |
Retrocopy | VGKSKPLTKGNKKGAKKKVSDPFSKKIWYNIKAPAMFNIRNIGKTLVMRTQGTKITYESLQGQVFEVSLA |
Parental | DLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLT-RDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG |
DL...E..FRK..LITEDVQGKNCLTNFHGMD.T.R.K...MVKKWQ.MIEA.VD.KT.D.YLL.LFCVG | |
Retrocopy | DLHSNEITFRKIQLITEDVQGKNCLTNFHGMDFT>RHKTWFMVKKWQAMIEARVDIKTIDSYLLHLFCVG |
Parental | F |
F | |
Retrocopy | F |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |