RetrogeneDB ID: | retro_dord_757 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_7838:8814..9348(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002250 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 59.14 % |
Parental protein coverage: | 68.82 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 5 |
Parental | NDEVAFRKFKLITEDVQGKNC-LTNF-HGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFT |
NDEVAFRK.KL..ED.Q.KNC.LTNF...MDL..DKM.SMVKKWQTM.EA.VDV...D.YLL.LFC..FT | |
Retrocopy | NDEVAFRKVKLSNEDNQRKNC<LTNF<YDMDLNGDKMYSMVKKWQTMTEAPVDVMSIDSYLLYLFCDSFT |
Parental | K-KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFV |
K.K.NN.IR...YAQHQ....I.K.MME..T........KEV.NKLIP.S......K...........FV | |
Retrocopy | K<KSNNKIREICYAQHQLFC*ILKMMMELRTEK*R--QMKEVLNKLIPESVLVKT*KKSLTSPSISSIFV |
Parental | RKV-KMLKKPKFELGKLMELHGEGGSSGKA-TGDETGAKVERADGY |
R...KMLKKPKFELGKLMELHGEG.SSGK..T......KVE.A.GY | |
Retrocopy | REL<KMLKKPKFELGKLMELHGEGNSSGKQ>TRVDISDKVE*ANGY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |