RetrogeneDB ID: | retro_dord_229 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_61:55391..55823(+) | ||
Located in intron of: | ENSDORG00000009917 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002250 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70. % |
Parental protein coverage: | 56.27 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA-FRKFKLITEDVQGKNCLTNFHG |
.A...FN.R.I.KTLVTRTQGT.I.SDGLKG.V...S.ADLQNDEVA.....KLITEDVQGK.CLTNFHG | |
Retrocopy | EALTIFNTRYIRKTLVTRTQGTNITSDGLKGWV---SDADLQNDEVA>XXXXKLITEDVQGKSCLTNFHG |
Parental | MDLT-RDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEI |
.D.T...KMCSMVKKWQT.IEAHVDV.T..GYLL.LFCVGFTK..N.Q..KTS.AQHQQ...I..KM.EI | |
Retrocopy | IDIT<LSKMCSMVKKWQTTIEAHVDVETIEGYLLCLFCVGFTKNHNRQTCKTS*AQHQQIYLI-QKMIEI |
Parental | MTREVQTNDL |
M..EVQTN.L | |
Retrocopy | MI*EVQTNKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |