RetrogeneDB ID: | retro_mputfur_506 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896916.1:18971854..18972771(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ST13 | ||
Ensembl ID: | ENSMPUG00000016432 | ||
Aliases: | None | ||
Description: | suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) [Source:HGNC Symbol;Acc:11343] |
Percent Identity: | 82.79 % |
Parental protein coverage: | 87.97 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | PSVLHTEEMRFLREWVESMGGKIPPATHKTKSEDSIKEEKPDSK-KAEENIKTDEPSSEESDLEIDNEGV |
PSVL.TEEM.FLRE.VESMG.KIPPATHKTK.EDSIKE.KPDS..KAEENIK.D.PSSEESDLE.D.EGV | |
Retrocopy | PSVLYTEEMHFLRE*VESMGDKIPPATHKTKFEDSIKE*KPDSR<KAEENIKIDKPSSEESDLETDHEGV |
Parental | IEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVF |
IEPDTD.PQEMGDEN.EITE.M.DQANDKKVAAIDALNDG.L.KAIDLFT.AIKLNP.LAILYAKRA.VF | |
Retrocopy | IEPDTDVPQEMGDENVEITEGMIDQANDKKVAAIDALNDGDLKKAIDLFTHAIKLNPGLAILYAKRAGVF |
Parental | IKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLKEVQPRA |
IKLQKPNAAI.DCDRAIEINPDSAQPYKWRGKAHRLLGHWEE.AHDLALACKLDYDEDASAMLKE.QPRA | |
Retrocopy | IKLQKPNAAIQDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEVAHDLALACKLDYDEDASAMLKEIQPRA |
Parental | QKIAEHRRKYERKREEREIKERIERVKKAREEHERAQREEEARRQSGAQYGSFPGGFPGGMPGNFPGGMP |
QKI.EH.RKYE.K.EE.EIKE.IERVKKA.EEHERAQREEEAR..SGAQY.SFPG.FPGGMP.NFPGGMP | |
Retrocopy | QKIDEHWRKYEQKHEE*EIKEKIERVKKAQEEHERAQREEEARQ*SGAQYSSFPGDFPGGMPCNFPGGMP |
Parental | GMAGGMPGMAGMPGLNEILSDPEVLAAM |
GMA.GMPG........E.L.....L..M | |
Retrocopy | GMA-GMPGLNEILSDPEVLAVMQDLEGM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Anolis carolinensis | ENSACAG00000005227 | 1 retrocopy | |
Ailuropoda melanoleuca | ENSAMEG00000013880 | 1 retrocopy | |
Bos taurus | ENSBTAG00000006202 | 4 retrocopies | |
Canis familiaris | ENSCAFG00000001139 | 14 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000012676 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000004644 | 11 retrocopies | |
Cavia porcellus | ENSCPOG00000002290 | 4 retrocopies | |
Felis catus | ENSFCAG00000011847 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000026747 | 16 retrocopies | |
Myotis lucifugus | ENSMLUG00000007764 | 2 retrocopies | |
Macaca mulatta | ENSMMUG00000019118 | 3 retrocopies | |
Monodelphis domestica | ENSMODG00000013042 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000016432 | 15 retrocopies | |
Otolemur garnettii | ENSOGAG00000016932 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000011858 | 14 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000000319 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000003165 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000011510 | 5 retrocopies |