RetrogeneDB ID: | retro_chof_2222 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_59433:4675..5188(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ST13 | ||
Ensembl ID: | ENSCHOG00000012676 | ||
Aliases: | None | ||
Description: | suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) [Source:HGNC Symbol;Acc:11343] |
Percent Identity: | 100. % |
Parental protein coverage: | 66.8 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EEKTDSKKSEENIKTEEPSSEESDLEIDNEGVIEPDTDAPQEMGDEAVEITEEMMDQANDKKVAAIDALS |
EEKTDSKKSEENIKTEEPSSEESDLEIDNEGVIEPDTDAPQEMGDEAVEITEEMMDQANDKKVAAIDALS | |
Retrocopy | EEKTDSKKSEENIKTEEPSSEESDLEIDNEGVIEPDTDAPQEMGDEAVEITEEMMDQANDKKVAAIDALS |
Parental | DGELQKAINLFTDAIKLNPRLAILYAKRASVFIKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLG |
DGELQKAINLFTDAIKLNPRLAILYAKRASVFIKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLG | |
Retrocopy | DGELQKAINLFTDAIKLNPRLAILYAKRASVFIKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLG |
Parental | HWEEAAHDLALACKLDYDEDASAMLKEVQPR |
HWEEAAHDLALACKLDYDEDASAMLKEVQPR | |
Retrocopy | HWEEAAHDLALACKLDYDEDASAMLKEVQPR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |