RetrogeneDB ID: | retro_vpac_25 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | GeneScaffold_1022:69692..69921(+) | ||
Located in intron of: | ENSVPAG00000005121 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPG | ||
Ensembl ID: | ENSVPAG00000007452 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:11163] |
Percent Identity: | 83.12 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MSKAHPPELKKFMDKKLSLKLNGG-RHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM |
MSKAHPP.LKKFMDKKLSLKLN.G.RHVQ.I..GFDPFMNLVID.CVE.ATSGQQNN.GMVVI.GN.IIM | |
Retrocopy | MSKAHPPKLKKFMDKKLSLKLNSG>RHVQQIFWGFDPFMNLVIDDCVETATSGQQNNTGMVVILGNNIIM |
Parental | LEALERV |
LEA.E.V | |
Retrocopy | LEASELV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |