Parental gene:

ENSSTOG00000008654

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393301.1:14443029..14450643(-)


>ENSSTOG00000008654
ATGAGCAAGGCTCATCCTCCCGAGCTGAAAAAATTTATGGACAAGAAGTTATCATTGAAATTAAATGGTGGCAGACATGT
CCAAGGAATATTGCGGGGATTTGATCCCTTCATGAATCTTGTAATAGATGAATGTGTGGAGATGGCAACTAGTGGACAAC
AGAACAATATTGGAATGGTGGTAATACGAGGAAACAGTATCATCATGTTAGAAGCCTTAGAACGAGTATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016000 possible_ortholog 9 retrogenes
Canis familiaris ENSCAFG00000032595 ortholog_one2many 14 retrogenes
Choloepus hoffmanni ENSCHOG00000000130 possible_ortholog 3 retrogenes
Callithrix jacchus ENSCJAG00000019313 possible_ortholog 18 retrogenes
Cavia porcellus ENSCPOG00000025022 ortholog_one2many 6 retrogenes
Dasypus novemcinctus ENSDNOG00000019446 possible_ortholog 18 retrogenes
Dipodomys ordii ENSDORG00000005623 possible_ortholog 2 retrogenes
Equus caballus ENSECAG00000019989 ortholog_one2many 5 retrogenes
Echinops telfairi ENSETEG00000010028 possible_ortholog 12 retrogenes
Felis catus ENSFCAG00000008118 possible_ortholog 8 retrogenes
Homo sapiens ENSG00000143977 ortholog_one2many 12 retrogenes
Gorilla gorilla ENSGGOG00000022169 possible_ortholog 3 retrogenes
Loxodonta africana ENSLAFG00000002301 ortholog_one2many 3 retrogenes
Microcebus murinus ENSMICG00000015369 ortholog_one2many 10 retrogenes
Myotis lucifugus ENSMLUG00000026490 possible_ortholog 3 retrogenes
Macaca mulatta ENSMMUG00000007961 possible_ortholog 3 retrogenes
Monodelphis domestica ENSMODG00000011528 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000007221 ortholog_one2many 2 retrogenes
Mus musculus ENSMUSG00000057278 ortholog_one2many 1 retrogene
Nomascus leucogenys ENSNLEG00000010182 ortholog_one2many 1 retrogene
Oryctolagus cuniculus ENSOCUG00000011214 possible_ortholog 2 retrogenes
Otolemur garnettii ENSOGAG00000015300 ortholog_one2many 13 retrogenes
Ochotona princeps ENSOPRG00000001093 possible_ortholog 6 retrogenes
Pongo abelii ENSPPYG00000012324 ortholog_one2many 14 retrogenes
Pan troglodytes ENSPTRG00000012029 ortholog_one2many 11 retrogenes
Pteropus vampyrus ENSPVAG00000004855 ortholog_one2many 3 retrogenes
Rattus norvegicus ENSRNOG00000016507 ortholog_many2many 1 retrogene
Sus scrofa ENSSSCG00000024776 possible_ortholog 1 retrogene
Tupaia belangeri ENSTBEG00000017381 possible_ortholog 66 retrogenes
Tarsius syrichta ENSTSYG00000005729 ortholog_one2many 11 retrogenes
Vicugna pacos ENSVPAG00000007452 possible_ortholog 10 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_128 92.11 100.00
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2. retro_itri_280 89.61 100.00
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3. retro_itri_353 83.12 97.37
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4. retro_itri_572 58.97 98.68
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5. retro_itri_589 81.43 89.47
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6. retro_itri_910 93.51 100.00
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7. retro_itri_947 54.55 100.00
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8. retro_itri_1116 67.11 97.37
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9. retro_itri_1260 77.33 97.37
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10. retro_itri_1395 68.83 100.00
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11. retro_itri_1871 57.35 88.16
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Download FASTA sequences of all ENSSTOG00000008654 retrocopies