RetrogeneDB ID: | retro_fcat_1006 | ||
Retrocopylocation | Organism: | Cat (Felis catus) | |
Coordinates: | B4:143654597..143654818(+) | ||
Located in intron of: | ENSFCAG00000011907 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSFCAG00000008118 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76. % |
Parental protein coverage: | 97.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MSKAHPPELK-KFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM |
..K.HPP.LK.KFMD.KLSL.LNGGRHVQGILRGF.PFMNL..D..VEMATSG.QN.IGMVVI.GN..I. | |
Retrocopy | INKSHPPKLK<KFMDEKLSLRLNGGRHVQGILRGFSPFMNLGKDGHVEMATSGRQNDIGMVVIPGNCVIL |
Parental | LEALE |
LEALE | |
Retrocopy | LEALE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 4 .94 RPM |
SRP017611_kidney | 0 .00 RPM | 8 .45 RPM |
SRP017611_liver | 0 .00 RPM | 3 .74 RPM |