RetrogeneDB ID: | retro_fcat_1467 | ||
Retrocopylocation | Organism: | Cat (Felis catus) | |
Coordinates: | D1:103114208..103114426(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSFCAG00000008118 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.08 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MSKAHPPEL-KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV-IRGNSII |
M.KAHPPEL....MDKKLSLK.N.GRHVQG.L.GF.PFM...ID..V.MATSGQ...IGMVV.IRGNSII | |
Retrocopy | MNKAHPPELXXXXMDKKLSLKSN-GRHVQGPLQGFNPFM---IDGSVQMATSGQKSSIGMVV<IRGNSII |
Parental | MLEALERV |
MLEALER. | |
Retrocopy | MLEALERI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 4 .94 RPM |
SRP017611_kidney | 0 .00 RPM | 8 .45 RPM |
SRP017611_liver | 0 .00 RPM | 3 .74 RPM |