Parental gene:

ENSFCAG00000008118

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:A3:89522360..89532480(-)


>ENSFCAG00000008118
ATGAGCAAAGCTCACCCTCCCGAGTTGAAAAAATTTATGGACAAGAAATTATCATTGAAATTAAATGGTGGCAGACATGT
CCAAGGAATATTGCGGGGGTTCGATCCCTTTATGAATCTTGTGATAGATGAATGTGTGGAGATGGCAACTAGTGGGCAAC
AGAACAATATTGGAATGGTGGTAATTCGAGGAAATAGTATCATCATGTTAGAAGCCTTGGAACGAGTATAA

Library Parental gene expression (RPM)
SRP017611_liver 3 .74 RPM
SRP017611_kidney 8 .45 RPM
SRP017611_brain 4 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016000 possible_ortholog 9 retrogenes
Canis familiaris ENSCAFG00000032595 possible_ortholog 14 retrogenes
Choloepus hoffmanni ENSCHOG00000000130 possible_ortholog 3 retrogenes
Callithrix jacchus ENSCJAG00000019313 possible_ortholog 18 retrogenes
Cavia porcellus ENSCPOG00000025022 possible_ortholog 6 retrogenes
Dasypus novemcinctus ENSDNOG00000019446 possible_ortholog 18 retrogenes
Dipodomys ordii ENSDORG00000005623 possible_ortholog 2 retrogenes
Equus caballus ENSECAG00000019989 possible_ortholog 5 retrogenes
Echinops telfairi ENSETEG00000010028 possible_ortholog 12 retrogenes
Homo sapiens ENSG00000143977 possible_ortholog 12 retrogenes
Gorilla gorilla ENSGGOG00000022169 possible_ortholog 3 retrogenes
Loxodonta africana ENSLAFG00000002301 ortholog_one2many 3 retrogenes
Microcebus murinus ENSMICG00000015369 possible_ortholog 10 retrogenes
Myotis lucifugus ENSMLUG00000026490 possible_ortholog 3 retrogenes
Macaca mulatta ENSMMUG00000007961 possible_ortholog 3 retrogenes
Monodelphis domestica ENSMODG00000011528 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000007221 possible_ortholog 2 retrogenes
Mus musculus ENSMUSG00000057278 possible_ortholog 1 retrogene
Nomascus leucogenys ENSNLEG00000010182 possible_ortholog 1 retrogene
Oryctolagus cuniculus ENSOCUG00000011214 possible_ortholog 2 retrogenes
Otolemur garnettii ENSOGAG00000015300 possible_ortholog 13 retrogenes
Ochotona princeps ENSOPRG00000001093 possible_ortholog 6 retrogenes
Pongo abelii ENSPPYG00000012324 possible_ortholog 14 retrogenes
Pan troglodytes ENSPTRG00000012029 possible_ortholog 11 retrogenes
Pteropus vampyrus ENSPVAG00000004855 possible_ortholog 3 retrogenes
Rattus norvegicus ENSRNOG00000016507 possible_ortholog 1 retrogene
Sus scrofa ENSSSCG00000024776 possible_ortholog 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000008654 possible_ortholog 11 retrogenes
Tupaia belangeri ENSTBEG00000017381 possible_ortholog 66 retrogenes
Tarsius syrichta ENSTSYG00000005729 possible_ortholog 11 retrogenes
Vicugna pacos ENSVPAG00000007452 ortholog_one2one 10 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_82 97.37 100.00
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2. retro_fcat_90 85.53 100.00
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3. retro_fcat_562 85.71 100.00
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4. retro_fcat_1006 76.00 97.37
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5. retro_fcat_1092 78.38 96.05
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6. retro_fcat_1248 72.37 98.68
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7. retro_fcat_1467 73.08 100.00
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8. retro_fcat_1893 66.23 100.00
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Download FASTA sequences of all ENSFCAG00000008118 retrocopies