RetrogeneDB ID: | retro_mmul_300 | ||
Retrocopylocation | Organism: | Rhesus macaque (Macaca mulatta) | |
Coordinates: | 18:52585960..52586191(+) | ||
Located in intron of: | ENSMMUG00000007581 | ||
Retrocopyinformation | Ensembl ID: | ENSMMUG00000032514 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MMU.18325 | ||
Ensembl ID: | ENSMMUG00000007961 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein G [Source:RefSeq peptide;Acc:NP_001180369] |
Percent Identity: | 98.68 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIML |
MSKAHPPELKKFMDKKLSLKLNGGRHVQGIL.GFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIML | |
Retrocopy | MSKAHPPELKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIML |
Parental | EALERV |
EALERV | |
Retrocopy | EALERV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain | 0 .00 RPM | 1 .34 RPM |
SRP007412_brain_prefrontal_cortex | 0 .08 RPM | 3 .57 RPM |
SRP007412_cerebellum | 0 .00 RPM | 1 .42 RPM |
SRP007412_heart | 0 .00 RPM | 2 .47 RPM |
SRP007412_kidney | 0 .00 RPM | 2 .35 RPM |
SRP007412_liver | 0 .00 RPM | 1 .70 RPM |
SRP007412_testis | 0 .00 RPM | 1 .32 RPM |