RetrogeneDB ID: | retro_itri_947 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393347.1:6758880..6759104(+) | ||
Located in intron of: | ENSSTOG00000022415 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000008654 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.55 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MSKAHPPELK-KFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM |
.SK..P..LK.K...K.LS.K.N.GRHV.GIL..FD.....VID.CV.MAT....NNIGM.VI.GNSI.. | |
Retrocopy | ISKV*PFKLK<KLIEKNLSFK*NSGRHV*GILWIFDS-LSFVIDKCVNMATYR*DNNIGMLVIQGNSINL |
Parental | LEALERV |
.E.L..V | |
Retrocopy | QEVLDGV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |