RetrogeneDB ID: | retro_vpac_359 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | scaffold_11983:48901..49116(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SLMO2 | ||
Ensembl ID: | ENSVPAG00000001044 | ||
Aliases: | None | ||
Description: | slowmo homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:15892] |
Percent Identity: | 55.26 % |
Parental protein coverage: | 52.08 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVSLG-SYLEGLMA |
.QEHS.VD....T.E..ST.I..T......ERL..KPH.QDP.KTVLT..AIITVKG......YL.GLM. | |
Retrocopy | LQEHSAVDSGDRTVEVTSTDILLTGLEY--ERLTCKPHLQDPGKTVLTHKAIITVKGFTAA<NYL-GLMT |
Parental | STISSN |
.TISS. | |
Retrocopy | NTISSH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |