RetrogeneDB ID: | retro_ogar_1650 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873558.1:7402212..7402725(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SLMO2 | ||
Ensembl ID: | ENSOGAG00000013382 | ||
Aliases: | None | ||
Description: | slowmo homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:15892] |
Percent Identity: | 73.99 % |
Parental protein coverage: | 86.08 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MKIWTSEHVFDHPWET--VTTAAMQKYPNPMNPSVVGVDVLDRHIDHSGKL-HSHRLLSTEWGLPSIVKS |
MK.WT.EH..DHP.E....TTAAMQKYPN.MNPSVVG.DVL.RH.DHSGKL.HS.R.LSTEWGLPSIVKS | |
Retrocopy | MKMWTLEHISDHP*EIKLLTTAAMQKYPNSMNPSVVGYDVLGRHTDHSGKL>HSPRPLSTEWGLPSIVKS |
Parental | LIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTILTQEAIITVKGV-- |
L.GA.R.KTYVQEHSVVDP.EKTMELKST..SF.N.VSVDE..IYKPHPQDPEKTILTQ.AII.VKGV.. | |
Retrocopy | LLGAVRPKTYVQEHSVVDPIEKTMELKSTDTSFINTVSVDENHIYKPHPQDPEKTILTQQAIIPVKGVKE |
Parental | SLSSYLEGLMASTISS-NASKGREAMEWVIHKL |
SLS...EGL.ASTISS..A.KG.EA.......L | |
Retrocopy | SLSRDHEGLTASTISS<LANKG*EAIRTLMVEL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |