Parental gene:

COX7B, ENSCJAG00000004045

Aliases:None
Description:cytochrome c oxidase subunit VIIb [Source:HGNC Symbol;Acc:2291]
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:69047124..69053255(+)


>ENSCJAG00000004045
ATGTTTCCCCTGGTCAAAAACGCACTGAGTCGTCTCCAAGTTCGAAGCATTCAGCAAACAATGGCAAGACAGAGCCACCA
GAAACGTACACCTGATTTTCATGACAAATACGGTAATGCTATATTAGCTGGTGGAGCTACTTTCTGTATTACTATGTGGA
CATATGTAATAACACAAATCGGAATAGAATGGAACCTGTCCCCTGTTGGCAGAGTCACCCCAAAGGAATGGAGAAATCAG
CAATAA

Library Parental gene expression (RPM)
SRP051959_spleen 20 .82 RPM
SRP051959_skeletal_muscle 84 .12 RPM
SRP051959_lymph_node 13 .08 RPM
SRP051959_lung 12 .51 RPM
SRP051959_liver 40 .59 RPM
SRP051959_kidney 40 .87 RPM
SRP051959_heart 62 .41 RPM
SRP051959_colon 21 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006153 ortholog_one2one 6 retrogenes
retro_amel_25, retro_amel_313, retro_amel_459, retro_amel_484, retro_amel_669, retro_amel_807,
Bos taurus ENSBTAG00000047768 ortholog_one2many 3 retrogenes
retro_btau_214, retro_btau_22, retro_btau_59,
Cavia porcellus ENSCPOG00000014781 ortholog_one2one 2 retrogenes
retro_cpor_117, retro_cpor_252,
Echinops telfairi ENSETEG00000016695 ortholog_one2one 9 retrogenes
retro_etel_1049, retro_etel_1180, retro_etel_1651, retro_etel_1736, retro_etel_1805, retro_etel_2057, retro_etel_59, retro_etel_860, retro_etel_910,
Felis catus ENSFCAG00000023091 ortholog_one2one 2 retrogenes
retro_fcat_534, retro_fcat_590,
Homo sapiens ENSG00000131174 ortholog_one2one 4 retrogenes
retro_hsap_157, retro_hsap_16, retro_hsap_2305, retro_hsap_920,
Gorilla gorilla ENSGGOG00000023347 ortholog_one2one 9 retrogenes
retro_ggor_1539, retro_ggor_1617, retro_ggor_1634, retro_ggor_1707, retro_ggor_1779, retro_ggor_245, retro_ggor_443, retro_ggor_52, retro_ggor_579,
Loxodonta africana ENSLAFG00000022996 ortholog_one2one 4 retrogenes
retro_lafr_27, retro_lafr_555, retro_lafr_716, retro_lafr_927,
Microcebus murinus ENSMICG00000014521 ortholog_one2one 3 retrogenes
retro_mmur_256, retro_mmur_379, retro_mmur_56,
Myotis lucifugus ENSMLUG00000022443 ortholog_one2one 3 retrogenes
retro_mluc_1491, retro_mluc_2521, retro_mluc_277,
Macaca mulatta ENSMMUG00000015861 ortholog_one2one 5 retrogenes
retro_mmul_1120, retro_mmul_1941, retro_mmul_2400, retro_mmul_571, retro_mmul_800,
Mus musculus ENSMUSG00000031231 ortholog_one2one 5 retrogenes
retro_mmus_195, retro_mmus_2062, retro_mmus_2157, retro_mmus_2731, retro_mmus_502,
Pongo abelii ENSPPYG00000020494 ortholog_one2one 18 retrogenes
retro_pabe_1824, retro_pabe_1904, retro_pabe_2016, retro_pabe_2017, retro_pabe_2025, retro_pabe_2026, retro_pabe_2028, retro_pabe_2029, retro_pabe_2030, retro_pabe_2034, retro_pabe_2038, retro_pabe_2121, retro_pabe_22, retro_pabe_270, retro_pabe_465, retro_pabe_587, retro_pabe_793, retro_pabe_836,
Pan troglodytes ENSPTRG00000022049 ortholog_one2one 9 retrogenes
retro_ptro_12, retro_ptro_1431, retro_ptro_1510, retro_ptro_153, retro_ptro_1629, retro_ptro_1714, retro_ptro_3014, retro_ptro_349, retro_ptro_760,
Pteropus vampyrus ENSPVAG00000003237 ortholog_one2one 2 retrogenes
retro_pvam_1, retro_pvam_1234,
Rattus norvegicus ENSRNOG00000028451 ortholog_one2one 5 retrogenes
retro_rnor_2351, retro_rnor_2387, retro_rnor_2959, retro_rnor_763, retro_rnor_999,
Sus scrofa ENSSSCG00000030970 ortholog_one2one 2 retrogenes
retro_sscr_938, retro_sscr_991,
Tursiops truncatus ENSTTRG00000004387 ortholog_one2one 3 retrogenes
retro_ttru_1097, retro_ttru_556, retro_ttru_7,
Vicugna pacos ENSVPAG00000001324 ortholog_one2one 2 retrogenes
retro_vpac_7, retro_vpac_87,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_345 68.75 98.77
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2. retro_cjac_844 59.21 92.59
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3. retro_cjac_973 65.06 98.77
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4. retro_cjac_2496 76.25 98.77
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5. retro_cjac_2716 54.88 97.53
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Download FASTA sequences of all ENSCJAG00000004045 retrocopies