Parental gene:

NACA, ENSECAG00000015242

Aliases:None
Description:nascent polypeptide-associated complex alpha subunit [Source:HGNC Symbol;Acc:7629]
Organism:Horse (Equus caballus)
Coordinates:6:74262170..74274023(-)


>ENSECAG00000015242
ATGCCCGGTGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCACAGCCCCAGGCTGAGACAGGGTCTGGAAC
AGAATCTGACAGTGATGAATCAGTACCAGAGCTCGAGGAACAGGATTCCACACAGGCAACCACACAACAAGCCCAGCTGG
CAGCAGCAGCTGAAATCGATGAAGAACCAGTCAGTAAAGCAAAACAGAGCCGGAGTGAAAAGAAGGCACGGAAGGCTATG
TCAAAACTGGGTCTTAGACAGGTTACAGGAGTTACTAGAGTCACTATCCGGAAATCTAAGAATATCCTCTTTGTCATCAC
AAAACCAGACGTCTACAAGAGTCCAGCTTCAGATACCTACATAGTTTTGGGGGAAGCCAAGATCGAGGATTTATCTCAGC
AAGCACAGCTAGCAGCTGCTGAGAAATTCAAAGTTCAAGGTGAGGCTGTTTCAAACATTCAAGAAAACACACAGACTCCA
ACTGTACAAGAGGAGAGTGAAGAAGAAGAGGTTGATGAAACGGGTGTGGAAGTTAAGGACATAGAATTGGTCATGTCACA
AGCAAATGTGTCAAGAGCAAAGGCAGTCCGAGCCTTGAAGAACAACAGTAATGATATTGTAAATGCTATTATGGAATTAA
CAATGTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 137 .45 RPM
SRP021940_embryo 261 .40 RPM
SRP021940_cerebellum 2 .65 RPM
SRP021940_testis 106 .15 RPM
SRP021940_placental_villous 127 .59 RPM
SRP021940_articular_cartilage 21 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004175 possible_ortholog 3 retrogenes
retro_amel_1725, retro_amel_1821, retro_amel_643,
Canis familiaris ENSCAFG00000000141 possible_ortholog 8 retrogenes
retro_cfam_1502, retro_cfam_1561, retro_cfam_1884, retro_cfam_1913, retro_cfam_2096, retro_cfam_2169, retro_cfam_710, retro_cfam_974,
Callithrix jacchus ENSCJAG00000010701 possible_ortholog 8 retrogenes
retro_cjac_1063, retro_cjac_1452, retro_cjac_1875, retro_cjac_2202, retro_cjac_2453, retro_cjac_2696, retro_cjac_2975, retro_cjac_3232,
Homo sapiens ENSG00000196531 ortholog_one2one 6 retrogenes
retro_hsap_3006, retro_hsap_3027, retro_hsap_3968, retro_hsap_3992, retro_hsap_737, retro_hsap_77,
Loxodonta africana ENSLAFG00000004598 possible_ortholog 6 retrogenes
retro_lafr_1107, retro_lafr_113, retro_lafr_1251, retro_lafr_166, retro_lafr_491, retro_lafr_958,
Myotis lucifugus ENSMLUG00000001169 possible_ortholog 16 retrogenes
retro_mluc_1147, retro_mluc_1653, retro_mluc_1668, retro_mluc_1756, retro_mluc_1767, retro_mluc_1851, retro_mluc_1881, retro_mluc_1941, retro_mluc_2587, retro_mluc_2600, retro_mluc_414, retro_mluc_492, retro_mluc_526, retro_mluc_641, retro_mluc_725, retro_mluc_861,
Macaca mulatta ENSMMUG00000003073 ortholog_one2one 4 retrogenes
retro_mmul_1233, retro_mmul_1933, retro_mmul_2066, retro_mmul_889,
Sarcophilus harrisii ENSSHAG00000002175 ortholog_one2one 1 retrogene
retro_shar_213,
Tursiops truncatus ENSTTRG00000002150 ortholog_one2one 2 retrogenes
retro_ttru_1157, retro_ttru_760,
Vicugna pacos ENSVPAG00000004028 possible_ortholog 2 retrogenes
retro_vpac_485, retro_vpac_611,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_785 80.37 98.60
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Download FASTA sequences of all ENSECAG00000015242 retrocopies