Parental gene:

RPS15A, ENSECAG00000019293

Aliases:None
Description:ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]
Organism:Horse (Equus caballus)
Coordinates:13:28239011..28244232(+)


>ENSECAG00000019293
ATGGTGCGCATGAATGTCCTGGCCGATGCTCTCAAGAGCATCAACAATGCCGAGAAGAGGGGCAAACGCCAGGTGCTCAT
TAGGCCGTGCTCCAAAGTCATCGTCCGGTTTCTGACTGTGATGATGAAGCATGGTTACATTGGCGAATTTGAAATCATCG
ATGACCACAGAGCTGGGAAGATTGTTGTGAACCTCACGGGCAGGTTAAACAAGTGTGGAGTGATCAGCCCCAGATTTGAC
GTGCAACTGAAAGATCTAGAAAAATGGCAAAATAACTTGCTCCCGTCCCGTCAGTTTGGTTTCATTGTACTGACAACCTC
AGCTGGCATCATGGACCATGAAGAAGCAAGACGAAAACACACAGGAGGGAAAATCCTGGGATTCTTTTTCTAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 225 .68 RPM
SRP021940_embryo 217 .09 RPM
SRP021940_cerebellum 101 .94 RPM
SRP021940_testis 150 .20 RPM
SRP021940_placental_villous 163 .48 RPM
SRP021940_articular_cartilage 315 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011083 ortholog_one2one 18 retrogenes
Bos taurus ENSBTAG00000020733 possible_ortholog 5 retrogenes
Callithrix jacchus ENSCJAG00000020071 ortholog_one2many 6 retrogenes
Cavia porcellus ENSCPOG00000021695 ortholog_one2one 12 retrogenes
Dasypus novemcinctus ENSDNOG00000008341 ortholog_one2one 45 retrogenes
Dipodomys ordii ENSDORG00000001557 ortholog_one2one 5 retrogenes
Homo sapiens ENSG00000134419 ortholog_one2one 37 retrogenes
Gorilla gorilla ENSGGOG00000026299 ortholog_one2one 32 retrogenes
Gadus morhua ENSGMOG00000005862 ortholog_many2many 1 retrogene
Latimeria chalumnae ENSLACG00000011476 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000026996 ortholog_one2many 13 retrogenes
Microcebus murinus ENSMICG00000012241 ortholog_one2one 20 retrogenes
Macaca mulatta ENSMMUG00000005593 ortholog_one2one 3 retrogenes
Oryctolagus cuniculus ENSOCUG00000000179 ortholog_one2one 25 retrogenes
Otolemur garnettii ENSOGAG00000013199 ortholog_one2one 14 retrogenes
Pongo abelii ENSPPYG00000007139 ortholog_one2one 2 retrogenes
Pan troglodytes ENSPTRG00000007823 ortholog_one2one 2 retrogenes
Pteropus vampyrus ENSPVAG00000002901 ortholog_one2one 14 retrogenes
Rattus norvegicus ENSRNOG00000018320 possible_ortholog 5 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000025222 ortholog_one2one 26 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_114 96.15 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ecab_485 76.19 80.00
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSECAG00000019293 retrocopies