Parental gene: | RPS14, ENSFCAG00000011085 |
| Aliases: | None |
| Description: | Ribosomal protein S14 [Source:UniProtKB/TrEMBL;Acc:Q66TU2] |
| Organism: | Cat (Felis catus) |
| Coordinates: | A1:196372938..196377129(+) |
>ENSFCAG00000011085
AATTCAGGGGAAAGGTTATCTCAAGAAATGGCACCTCGAAAGGGGAAAGAAAAGAAAGAAGAACAGGTCATCAGCCTTGG
ACCTCAGGTAGCTGAAGGAGAAAATGTGTTTGGCGTGTGCCACATCTTTGCATCCTTCAATGACACTTTTGTCCATGTCA
CCGATCTTTCTGGCAAGGAAACCATCTGCCGTGTGACTGGTGGGATGAAGGTGAAGGCTGACCGAGATGAGTCCTCTCCC
TACGCTGCCATGTTGGCTGCCCAGGATGTAGCCCAGAGGTGCAAGGAGCTGGGCATCACCGCTCTCCACATCAAACTCCG
GGCCACAGGAGGAAATAGAACCAAGACCCCTGGACCTGGGGCCCAGTCAGCCCTCAGAGCCCTTGCCCGCTCAGGAATGA
AGATTGGGCGGATTGAGGATGTCACCCCCATCCCCTCCGATAGCACCCGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTG
TGA
AATTCAGGGGAAAGGTTATCTCAAGAAATGGCACCTCGAAAGGGGAAAGAAAAGAAAGAAGAACAGGTCATCAGCCTTGG
ACCTCAGGTAGCTGAAGGAGAAAATGTGTTTGGCGTGTGCCACATCTTTGCATCCTTCAATGACACTTTTGTCCATGTCA
CCGATCTTTCTGGCAAGGAAACCATCTGCCGTGTGACTGGTGGGATGAAGGTGAAGGCTGACCGAGATGAGTCCTCTCCC
TACGCTGCCATGTTGGCTGCCCAGGATGTAGCCCAGAGGTGCAAGGAGCTGGGCATCACCGCTCTCCACATCAAACTCCG
GGCCACAGGAGGAAATAGAACCAAGACCCCTGGACCTGGGGCCCAGTCAGCCCTCAGAGCCCTTGCCCGCTCAGGAATGA
AGATTGGGCGGATTGAGGATGTCACCCCCATCCCCTCCGATAGCACCCGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTG
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 122 .93 RPM |
| SRP017611_kidney | 275 .99 RPM |
| SRP017611_brain | 80 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004644 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000008570 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000018094 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020981 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000024408 | ortholog_one2one | 2 retrogenes | |
| Latimeria chalumnae | ENSLACG00000016164 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000031195 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013279 | possible_ortholog | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000002848 | possible_ortholog | 5 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013776 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010366 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000011509 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000721 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018774 | ortholog_one2one | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_622 | 60.17 | 70.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_670 | 62.59 | 85.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_857 | 90.79 | 95.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_fcat_925 | 76.60 | 56.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_fcat_1140 | 78.85 | 97.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000011085 retrocopies