Parental gene:

CBX3, ENSPCAG00000004904

Aliases:None
Description:chromobox homolog 3 [Source:HGNC Symbol;Acc:1553]
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_2579:14615..22824(+)


>ENSPCAG00000004904
ATGGCCTCCAATAAAACTACATTGCAAAAAATGGGAAGGAAGCAGAATGGAAAGAGTAAAAAAGTTGAAGAAGCAGAACC
TGAAGAATTTGTGGTAGAAAAAGTGCTGGACCGACGTGTAGTGAATGGAAAGGTGGAATATTTCCTGAAGTGGAAGGGAT
TTACAGATGCTGACAATACTTGGGAACCTGAAGAAAATTTAGATTGCCCGGAATTAATCGAAGCGTTTCTTAATTCTCAA
AAAGCTGGTAAAGAAAAAGATGGTACAAAAAGGAAGTCTTTATCTGACAGTGAGTCTGATGACAGCAAATCGAAGAAGAA
AAGAGATGCTGCTGACAAACCTAGAGGCTTTGCAAGAGGTCTTGATCCTGAACGAATAATTGGTGCCACAGACAGCAGTG
GAGAATTAATGTTTCTCATGAAGTGGAAAGATTCAGATGAGGCTGACCTGGTGCTGGCAAAAGAGGCAAACATGAAGTGC
CCACAAATTGTAATTGCGTTTTATGAAGAGAGACTAACTTGGCATTCTTGTCCAGAAGATGAAGCTCAATAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002897 possible_ortholog 11 retrogenes
Callithrix jacchus ENSCJAG00000007952 possible_ortholog 8 retrogenes
Equus caballus ENSECAG00000012780 ortholog_one2one 1 retrogene
Loxodonta africana ENSLAFG00000006907 ortholog_one2one 3 retrogenes
Mus musculus ENSMUSG00000029836 possible_ortholog 1 retrogene
Otolemur garnettii ENSOGAG00000016583 possible_ortholog 1 retrogene
Ochotona princeps ENSOPRG00000011713 ortholog_one2one 9 retrogenes
Procavia capensis ENSPCAG00000002381 within_species_paralog 2 retrogenes
Rattus norvegicus ENSRNOG00000011814 possible_ortholog 2 retrogenes
Sarcophilus harrisii ENSSHAG00000017913 ortholog_one2one 1 retrogene
Sus scrofa ENSSSCG00000016711 ortholog_one2one 4 retrogenes
Tarsius syrichta ENSTSYG00000008159 ortholog_one2one 6 retrogenes
Tursiops truncatus ENSTTRG00000000711 ortholog_one2one 7 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_108 62.59 80.33
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2. retro_pcap_166 86.34 100.00
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Download FASTA sequences of all ENSPCAG00000004904 retrocopies