Parental gene:

ENSTSYG00000008159

Aliases:None
Description:None
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_2897:15994..24648(+)


>ENSTSYG00000008159
CAAAAGATGGGAAGGAAACAGAATGGAAAGAGTAAAAAGGTTGAAGAGGCAGAGCCTGAAGAGTTTGTGGTGGAAAAAGT
ACTGGATCGACGTGTAGTGAATGGGAAAGTGGAATATTTCCTGAAGTGGAAGGGATTTACAGACGCTGACAATACTTGGG
AGCCTGAAGAAAATTTAGATTGTCCGGAGTTAATTGAAGCATTTCTTAATTCTCAAAAAGCTGGTAAAGAAAAAGATGGT
ACAAAAAGAAAGTCTTTATCTGACAGTGAGTCTGATGACAGCAAATCAAAGAAGAAAAGAGATGCTGCTGACAAACCGAG
GGGCTTTGCAAGAGGTCTTGATCCTGAAAGAATAATTGGTGCCACAGACAGCAGTGGAGAACTGATGTTTCTCATGAAAT
GGAAAGATTCAGATGAGGCAGACCTGGTGCTGGCGAAAGAGGCAAATATGAAATGTCCTCAGATTGTAATTGCTTTCTAT
GAGGAGAGACTAACTTGGCATTCTTGTCCAGAAGATGAAGCTCAATAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002897 possible_ortholog 11 retrogenes
retro_cfam_1157, retro_cfam_161, retro_cfam_1811, retro_cfam_1823, retro_cfam_1849, retro_cfam_2083, retro_cfam_502, retro_cfam_594, retro_cfam_739, retro_cfam_931, retro_cfam_948,
Callithrix jacchus ENSCJAG00000007952 possible_ortholog 8 retrogenes
retro_cjac_1100, retro_cjac_1414, retro_cjac_1612, retro_cjac_2405, retro_cjac_2623, retro_cjac_2728, retro_cjac_3322, retro_cjac_869,
Equus caballus ENSECAG00000012780 ortholog_one2one 1 retrogene
retro_ecab_784,
Loxodonta africana ENSLAFG00000006907 ortholog_one2one 3 retrogenes
retro_lafr_661, retro_lafr_687, retro_lafr_776,
Mus musculus ENSMUSG00000029836 possible_ortholog 1 retrogene
retro_mmus_77,
Otolemur garnettii ENSOGAG00000016583 possible_ortholog 1 retrogene
retro_ogar_136,
Ochotona princeps ENSOPRG00000011713 ortholog_one2many 9 retrogenes
retro_opri_103, retro_opri_159, retro_opri_209, retro_opri_300, retro_opri_429, retro_opri_569, retro_opri_598, retro_opri_728, retro_opri_733,
Procavia capensis ENSPCAG00000004904 ortholog_one2one 2 retrogenes
retro_pcap_108, retro_pcap_166,
Rattus norvegicus ENSRNOG00000011814 possible_ortholog 2 retrogenes
retro_rnor_120, retro_rnor_301,
Sarcophilus harrisii ENSSHAG00000017913 ortholog_one2many 1 retrogene
retro_shar_153,
Sus scrofa ENSSSCG00000016711 ortholog_one2many 4 retrogenes
retro_sscr_1031, retro_sscr_204, retro_sscr_420, retro_sscr_755,
Tarsius syrichta ENSTSYG00000004769 within_species_paralog 2 retrogenes
retro_tsyr_1672, retro_tsyr_467,
Tursiops truncatus ENSTTRG00000000711 ortholog_one2one 7 retrogenes
retro_ttru_1238, retro_ttru_1247, retro_ttru_1851, retro_ttru_294, retro_ttru_52, retro_ttru_591, retro_ttru_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_203 51.20 69.14
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2. retro_tsyr_583 96.59 100.00
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3. retro_tsyr_1459 91.34 72.57
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4. retro_tsyr_1545 84.09 100.00
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5. retro_tsyr_1552 96.05 100.00
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6. retro_tsyr_1645 63.45 80.00
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Download FASTA sequences of all ENSTSYG00000008159 retrocopies