RetrogeneDB ID: | retro_amel_1106 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192908.1:548719..549144(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26L1 | ||
Ensembl ID: | ENSAMEG00000011270 | ||
Aliases: | None | ||
Description: | ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050] |
Percent Identity: | 66.43 % |
Parental protein coverage: | 97.93 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MKFNPCVTSDGSKTRKRRFNAPSHVRRKIMSSPLSEELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNP.VTSDGSK..K..F.AP..V.RK..SSP.S.EL..KYN..SMPI..DDEVQVV.GH.KGQQI.KV | |
Retrocopy | MKFNPFVTSDGSKIPKCHFSAPVLVQRKVVSSPPSKELWEKYNICSMPICRDDEVQVV*GH*KGQQISKV |
Parental | VQVYRKKYVIYI-ERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQFGKEKGKYKEEL |
VQVYRKK.VIYI..RVQ.EKANGTTVHV.IHPSKVVITRLKLD.D...................KYKEEL | |
Retrocopy | VQVYRKKWVIYI<QRVQCEKANGTTVHVDIHPSKVVITRLKLDQDQXXXXXXXXXXXXXXXXXXKYKEEL |
Parental | IEK |
.EK | |
Retrocopy | TEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |