RetrogeneDB ID: | retro_amel_499 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192478.1:2369322..2369714(+) | ||
Located in intron of: | ENSAMEG00000012672 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000002453 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.11 % |
Parental protein coverage: | 89.12 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | MKFNPFVTSD-RSKNRKRHFNAPSHIRRKIMSSPL-SKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIG |
MKFNPFVTSD.R....K.HFNAPSHI.RKIM.S.L.SK.LRQKYNV.SMPI.KDDEVQ.V..H.KGQ.IG | |
Retrocopy | MKFNPFVTSD>RARTVK-HFNAPSHIHRKIMPSLL>SKKLRQKYNVQSMPIQKDDEVQFV*VHTKGQHIG |
Parental | KVVQVYRKKYVIYIERVQREKANGT-TVHVGIHPSKVVITRLKLDKDRKKI-LERKAKSRQVGKE |
KVVQVYRKKY.IY.E.VQ.EK.NGT.TVHVG..PS..V....K.D.D.KKI.LE.KAKS.Q.GKE | |
Retrocopy | KVVQVYRKKYIIYTE*VQ*EKENGT>TVHVGTPPSNLVSSKRKMDRDDKKI<LECKAKSHQEGKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |