RetrogeneDB ID: | retro_amel_1477 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193466.1:141507..141942(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26L1 | ||
Ensembl ID: | ENSAMEG00000011270 | ||
Aliases: | None | ||
Description: | ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050] |
Percent Identity: | 62.59 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | MKFNPCVTSDGSKTRKRRFNAPSHVRRKIMSSP-LSEELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGK |
MKFNP.VT.D.SK..K..F.A..H...KI.S...LS..L.QK.NV.SMP..KDD.VQV..GHY...Q.G. | |
Retrocopy | MKFNPFVT*DCSKNHKHCFRALLHIPKKITSAS<LSMQLQQKDNVCSMPVHKDDKVQVAQGHYNDHQVGM |
Parental | VVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDR-KKILERKAKSRQFGKEKGKYKEE |
VVQV.RK.Y.IYIE....EKAN..T.HVG..PS.VVI.RLKL.KDR.KKI.E.KAK..Q.GKEKGKYKEE | |
Retrocopy | VVQV*RKEYIIYIE*MKPEKANSITLHVGTNPSRVVIIRLKLNKDR>KKIIECKAKF*QLGKEKGKYKEE |
Parental | LIEKMQN |
L.EKMQ. | |
Retrocopy | LTEKMQD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |