RetrogeneDB ID: | retro_chof_804 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_150562:168..817(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSCHOG00000012669 | ||
Aliases: | None | ||
Description: | etoposide induced 2.4 [Source:HGNC Symbol;Acc:13276] |
Percent Identity: | 66.82 % |
Parental protein coverage: | 61.9 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | EFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRK-PHPFP-SVSKIIADMLFNLLLQALFLI |
EFFL.S.FSALWVLPLFV.SK.VNAIWFQDIADLAFEVSGRK...P.P.SVSKI.ADM.F....Q.LFL. | |
Retrocopy | EFFLQSTFSALWVLPLFVISKGVNAIWFQDIADLAFEVSGRKEASPVP>SVSKITADMFFS---QFLFLT |
Parental | QGMFVSLFPIHLIGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQ |
QG..VSL.PIHLIG.LVS.LHMSLLYSLY..E..WFNK..EM.Q.LSN.ERNWPYY.GFGLPL.FLTAMQ | |
Retrocopy | QGISVSLLPIHLIGLLVSVLHMSLLYSLYYSECCWFNKETEMYQLLSNMERNWPYYLGFGLPLPFLTAMQ |
Parental | SSYIISGCLFSIFFPLFIISANEAKPGKAYLFQLRLFSLVVFLSNRLFHKTVYLQSALSSSTSAEKFSSP |
SSY.ISGCLFSIFF.................FQL..FSLVVFLS..L...........SS.T.AEKF..P | |
Retrocopy | SSYTISGCLFSIFFICYQHQ*SKDPWKNIFFFQLCPFSLVVFLSSTLPQDGLSQSALSSS-TFAEKFLLP |
Parental | HPSPAKLKAAAGH |
HPS...LK.AAGH | |
Retrocopy | HPS--RLKGAAGH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |