RetrogeneDB ID: | retro_shar_433 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL842636.1:1381..1923(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSSHAG00000017333 | ||
Aliases: | None | ||
Description: | etoposide induced 2.4 [Source:HGNC Symbol;Acc:13276] |
Percent Identity: | 95.05 % |
Parental protein coverage: | 53.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MADSVKTFLHDLVRGIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRAQ-SEERKQESEPRIVS |
MADSVKTFLHDLVRGIKDSIWGICTISKLD.RIQQKREEQR.RRASSVLAQRRAQ..EE.KQESE.RIVS | |
Retrocopy | MADSVKTFLHDLVRGIKDSIWGICTISKLDTRIQQKREEQRQRRASSVLAQRRAQ<NEEQKQESELRIVS |
Parental | RIFQCCAWNGGVFWLSLLLFYRVFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFSALWVLPLFVLSK |
RIFQCCAWNGGVFWLSLLLFY.VFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFS.LWVLPLFVLSK | |
Retrocopy | RIFQCCAWNGGVFWLSLLLFYQVFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFSTLWVLPLFVLSK |
Parental | VVNAIWFQDIADLAFEVSGRKPQPFPSVSKIIADMLFNLLLQ |
VV.AIWFQDIADLAFEVSGRKPQPFPSVSKIIADMLFNLLLQ | |
Retrocopy | VVSAIWFQDIADLAFEVSGRKPQPFPSVSKIIADMLFNLLLQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |