RetrogeneDB ID: | retro_ogar_1379 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873544.1:9484856..9485868(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSOGAG00000001838 | ||
Aliases: | None | ||
Description: | etoposide induced 2.4 [Source:HGNC Symbol;Acc:13276] |
Percent Identity: | 83.14 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 7 |
Number of frameshifts detected | 3 |
Parental | MADSVKTFLQDLARGIKDSIWG-ICTISKLDARIQQKRE-EQRRRRASS-VLAQRRAQSTERKQESEPRI |
MADSVKTFL.DLARGIKDSIWG.ICTI.KLDARIQQKRE......R..S..LAQR.AQSTE..QESEP.I | |
Retrocopy | MADSVKTFL*DLARGIKDSIWG>ICTILKLDARIQQKRE<VEQHQRRVSSILAQRGAQSTEQEQESEPHI |
Parental | VSRIFQCCAWNGGVFWCSLLLFYRMFIPGLQYVTALIIGDPS-LHGVFWSWLEFFLTSIFSALWVLPLFV |
V..IFQ.CA.NGGVFWCSLLLFY.MFIPGL.YVTALIIGD.S.LHGVFWSW.EFFLTSIFSALWVLPLFV | |
Retrocopy | VN*IFQGCA*NGGVFWCSLLLFY*MFIPGL*YVTALIIGDLS>LHGVFWSWPEFFLTSIFSALWVLPLFV |
Parental | LSKVVNAIWFQDIADLAFEVSGRRPHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLL |
.....N.IWFQDIADLAFEVS.RRPHPF..VS.IIAD.LFN.LLQALFLIQGMFVSLFPIHLVGQLVSLL | |
Retrocopy | M----NTIWFQDIADLAFEVSRRRPHPFSGVSRIIADILFNFLLQALFLIQGMFVSLFPIHLVGQLVSLL |
Parental | HMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIIS |
HMSLLYSLYCF.Y.W.NKGIEMHQ.LS.IERNWPYYFGF.L.LAFL.A..SSYI.SGCLFSILF.LFIIS | |
Retrocopy | HMSLLYSLYCFTYHWLNKGIEMHQQLSHIERNWPYYFGFSLLLAFLMAI*SSYIVSGCLFSILFSLFIIS |
Parental | ANEAKTPGKAYLFQLRLFSLVVFLSNRLFHKTVYLQSALSSSTSAETIPSPHPSPAKPKAAAGH |
ANEAKTPGKAYLFQL.LFSLVVFLSN.LFHKT.YL.SALSSSTS.E..P.PHPSPAKPKAAAGH | |
Retrocopy | ANEAKTPGKAYLFQLQLFSLVVFLSN*LFHKTGYLPSALSSSTSTEMFPLPHPSPAKPKAAAGH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |