RetrogeneDB ID: | retro_itri_1373 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393462.1:3613023..3613492(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSSTOG00000004299 | ||
Aliases: | None | ||
Description: | etoposide induced 2.4 [Source:HGNC Symbol;Acc:13276] |
Percent Identity: | 77.36 % |
Parental protein coverage: | 56.47 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | IFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFL-IQGMFVSL |
I.SAL..L..FVLSKVVN.IWFQ.IADLAFEV.GRKPHPFP.VSKIIADMLFNLLLQALFL..QG.FVS. | |
Retrocopy | IVSALGMLHRFVLSKVVNVIWFQYIADLAFEVPGRKPHPFPHVSKIIADMLFNLLLQALFL<LQGVFVSF |
Parental | FPIHLVGQLVSLLHMSLLYSLYC-FEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIIS |
FPIHLVGQLV.L..M.LLYSLYC.FE..W.N.GIE.HQ.LSN.ERNWPYY.GFGLPLAFLTAMQ.SY... | |
Retrocopy | FPIHLVGQLVTLQLMFLLYSLYC<FESHWLNNGIERHQ*LSNLERNWPYYLGFGLPLAFLTAMQFSYNVR |
Parental | GCLFSILFPLFIISANEAK |
G.LFS.L.PL..ISA.EAK | |
Retrocopy | GSLFSPLSPLLSISAKEAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |