Parental gene: | EI24, ENSLAFG00000010888 |
| Aliases: | None |
| Description: | None |
| Organism: | Elephant (Loxodonta africana) |
| Coordinates: | scaffold_50:15877946..15889249(-) |
>ENSLAFG00000010888
CACTTCCCTCTCTTCTGTGTAGTTGATCGTTGGGGTGGTGAAGAAATGGCTGACAGTGTCAAAACCTTTCTCCAGGACCT
GGCCAGGGGAATCAAGGACTCCATCTGGGGTATCTGTACCATCTCAAAGCTGGATGCTCGAATACAACAGAAGAGGGAGG
AACAACGTCGAAGAAGGGCAAGCAGTGTCCTGGCACAGAGGAGAGCCCAGAGTATAGAGCGGAAGCAAGAGAGTGAGCCA
CGTATCGTTAGTAGAATTTTCCAGTGTTGCGCTTGGAATGGAGGAGTATTTTGGTTGAGTCTCCTCTTGTTTTACCGAGT
GTTTATTCCTGGGCTTCAGTCAGTAACAGCACAAATTATTGGTGATCCATCATTGCACGGAGATGTTTGGTCGTGGCTGG
AATTCTTCCTCACATCAATTTTCAGTGCTCTTTGGGTGCTCCCCCTGTTTGTGCTTAGCAAAGTTGTCAATGCCATTTGG
TTCCAAGATATAGCTGATCTGGCATTTGAAGTGTCAGGGAGGAAGCCTCACCCATTCCCTAGTGTCAGCAAAATAATTGC
TGATATGCTCTTCAACCTTCTGCTGCAGGCTCTTTTCCTTCTCCAGGGAATGTTTGTGAGTCTCTTTCCCATCCATCTTG
TTGGTCAGCTGGTTAGTCTCCTGCATATGTCCCTTCTGTATTCTCTGTACTGCTTTGAATATCGCTGGTTCAATAAAGGA
ATTGAAATGCACCAGCGGTTGTCAAACATAGAAAGGAATTGGCCTTACTACTTTGGATTTGGTTTGCCCTTGGCTTTCCT
CACAGCCATGCAGTCCTCATACATTATCAGTGGCTGCCTCTTCTCCATCCTCTTTCCTTTATTCATTATCAGCGCCAATG
AAGCAAAGACCCCTGGCAAAGCATACCTTTTTCAGTTGCGCCTCTTCTCCTTGGTGGTCTTCTTGAGCAACAGACTCTTT
CACAAGACGGTTTACCTGCAGTCTGCTCTGAGTAGCTCAACGTCTGCCGAGAAGTTCCCTTCACCACACCCGTCTCCTGC
CAAACTGAAGGCTGCTGCAGGCCAC
CACTTCCCTCTCTTCTGTGTAGTTGATCGTTGGGGTGGTGAAGAAATGGCTGACAGTGTCAAAACCTTTCTCCAGGACCT
GGCCAGGGGAATCAAGGACTCCATCTGGGGTATCTGTACCATCTCAAAGCTGGATGCTCGAATACAACAGAAGAGGGAGG
AACAACGTCGAAGAAGGGCAAGCAGTGTCCTGGCACAGAGGAGAGCCCAGAGTATAGAGCGGAAGCAAGAGAGTGAGCCA
CGTATCGTTAGTAGAATTTTCCAGTGTTGCGCTTGGAATGGAGGAGTATTTTGGTTGAGTCTCCTCTTGTTTTACCGAGT
GTTTATTCCTGGGCTTCAGTCAGTAACAGCACAAATTATTGGTGATCCATCATTGCACGGAGATGTTTGGTCGTGGCTGG
AATTCTTCCTCACATCAATTTTCAGTGCTCTTTGGGTGCTCCCCCTGTTTGTGCTTAGCAAAGTTGTCAATGCCATTTGG
TTCCAAGATATAGCTGATCTGGCATTTGAAGTGTCAGGGAGGAAGCCTCACCCATTCCCTAGTGTCAGCAAAATAATTGC
TGATATGCTCTTCAACCTTCTGCTGCAGGCTCTTTTCCTTCTCCAGGGAATGTTTGTGAGTCTCTTTCCCATCCATCTTG
TTGGTCAGCTGGTTAGTCTCCTGCATATGTCCCTTCTGTATTCTCTGTACTGCTTTGAATATCGCTGGTTCAATAAAGGA
ATTGAAATGCACCAGCGGTTGTCAAACATAGAAAGGAATTGGCCTTACTACTTTGGATTTGGTTTGCCCTTGGCTTTCCT
CACAGCCATGCAGTCCTCATACATTATCAGTGGCTGCCTCTTCTCCATCCTCTTTCCTTTATTCATTATCAGCGCCAATG
AAGCAAAGACCCCTGGCAAAGCATACCTTTTTCAGTTGCGCCTCTTCTCCTTGGTGGTCTTCTTGAGCAACAGACTCTTT
CACAAGACGGTTTACCTGCAGTCTGCTCTGAGTAGCTCAACGTCTGCCGAGAAGTTCCCTTCACCACACCCGTCTCCTGC
CAAACTGAAGGCTGCTGCAGGCCAC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000990 | ortholog_one2many | 2 retrogenes | |
| Bos taurus | ENSBTAG00000007202 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000010898 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000012669 | ortholog_one2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000007272 | ortholog_one2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000002362 | ortholog_one2many | 4 retrogenes | |
| Equus caballus | ENSECAG00000015861 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000003274 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000015100 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000149547 | ortholog_one2many | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000003023 | ortholog_one2many | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001583 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010009 | ortholog_one2many | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000007451 | ortholog_one2many | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014670 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001838 | ortholog_one2many | 6 retrogenes | |
| Ochotona princeps | ENSOPRG00000013491 | ortholog_one2many | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000012762 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004033 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000004444 | ortholog_one2many | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000004532 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000030391 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000017333 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004299 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000004747 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lafr_262 | 74.92 | 87.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_lafr_263 | 78.01 | 67.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_lafr_264 | 77.92 | 63.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_lafr_265 | 77.13 | 52.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_lafr_394 | 77.04 | 54.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_lafr_395 | 73.37 | 92.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_lafr_396 | 72.40 | 52.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_lafr_397 | 71.03 | 58.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_lafr_398 | 78.76 | 53.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_lafr_399 | 75.10 | 68.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_lafr_566 | 80.63 | 52.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_lafr_589 | 78.54 | 61.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_lafr_626 | 81.58 | 52.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_lafr_627 | 74.29 | 87.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_lafr_999 | 72.38 | 58.03 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLAFG00000010888 retrocopies