RetrogeneDB ID: | retro_nleu_684 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397269.1:33030764..33031775(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSNLEG00000007451 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.43 % |
Parental protein coverage: | 99.71 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | MADSVKTFLQDLARGIKDSIWGICTIS-KLDARIQQKR-EEQRRRRASSVLAQRRAQSIERKQESEPRIV |
M.DSVKTFLQDL.RG.KDSIW.ICTIS..LDA.I.QKR.E...R.RAS.VLAQR..QSIE..QESEP... | |
Retrocopy | MTDSVKTFLQDLPRGVKDSIWDICTIS<QLDAPIHQKR>EQRGR-RASIVLAQRIPQSIEWEQESEP-AS |
Parental | SRIFQCCAWNGGVFWFSLLLFYRVFIPVLQSVTARIIGDPSLHGDVWSWLEFFLTSIFSALWVLPLFVLS |
.RIFQCCAW.GGV.WFSLLL.Y.VFIP.LQ.VTA.I..DPSL.GD.WSWLEFFL..I..A..VLPLF..S | |
Retrocopy | GRIFQCCAWGGGVLWFSLLLLYPVFIPGLQ*VTA*ITYDPSLCGDAWSWLEFFLI*IPRAFRVLPLFMPS |
Parental | KVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHM |
KVVNAIWFQD.ADLAFE.SG.KPHPFPSV.KI.ADML.NLLLQALF.IQGM.VSLFP.HLVGQLV.L.H. | |
Retrocopy | KVVNAIWFQDTADLAFEASGKKPHPFPSVHKITADMLSNLLLQALFPIQGMSVSLFPTHLVGQLVTLRHL |
Parental | SLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISA- |
SLL.S.YCF.Y.WFNKGIEMHQRLSNIERNW.YYFGFGLPLAFLTAMQSSYII.GCLFSILFPLFIISA. | |
Retrocopy | SLLDSFYCFKYGWFNKGIEMHQRLSNIERNWLYYFGFGLPLAFLTAMQSSYIIHGCLFSILFPLFIISA< |
Parental | NEAKTPGKAYLFQLRLFSLVVFLSNRLFHKTV-YLQSALSSSTSAEKFPSPHPSPAKLKAAAG |
NEAK.PG.AYLF.L.L.S...FLSNRLFHKTV..LQSALSSSTSAEKFPSPH.SP.KLK..AG | |
Retrocopy | NEAKIPGQAYLFELHLSSFMFFLSNRLFHKTV>HLQSALSSSTSAEKFPSPHTSPPKLKVTAG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |