RetrogeneDB ID: | retro_pcap_421 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_8017:6407..6671(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARPC3 | ||
Ensembl ID: | ENSPCAG00000011858 | ||
Aliases: | None | ||
Description: | actin related protein 2/3 complex, subunit 3, 21kDa [Source:HGNC Symbol;Acc:706] |
Percent Identity: | 62.37 % |
Parental protein coverage: | 52.25 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | CNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPLND |
CNSKSQG.KEMYTLG....PIPGE.G.PL.A.YAK....Q.D.V.RA.L.QLRQE.G.RL.EK..DP... | |
Retrocopy | CNSKSQGKKEMYTLGYHSLPIPGELGVPLTATYAK----QKDGVTRASL*QLRQEMGMRLSEKGLDPQKY |
Parental | KPSKWWTCFVKRQFMNKSLSGPG |
KP.K.W..FVKR.F.N.SL..PG | |
Retrocopy | KPGK*WSYFVKRLFTN-SLLTPG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |