Parental gene:

SNRPG, ENSCPOG00000025022

Aliases:None
Description:small nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:11163]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_37:18434442..18440655(+)


>ENSCPOG00000025022
ATGAGCAAAGCTCACCCTCCGGAGCTGAAAAAATTTATGGACAAGAAGTTATCATTGAAATTAAATGGTGGCAGGCATGT
CCAAGGAATATTGCGAGGATTTGATCCCTTTATGAATCTTGTGATAGATGAATGTGTGGAGATGGCAACTAGTGGGCAAC
AGAACAATATTGGAATGGTGGTAATACGAGGAAATAGTATCATTATGCTGGAAGCCTTAGAACGAGTTTAA

Library Parental gene expression (RPM)
SRP017611_liver 10 .71 RPM
SRP017611_kidney 15 .07 RPM
SRP017611_brain 7 .13 RPM
SRP040447_lung 14 .33 RPM
SRP040447_skeletal_muscle 10 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032595 ortholog_one2one 14 retrogenes
Callithrix jacchus ENSCJAG00000019313 possible_ortholog 18 retrogenes
Equus caballus ENSECAG00000019989 ortholog_one2one 5 retrogenes
Felis catus ENSFCAG00000008118 possible_ortholog 8 retrogenes
Homo sapiens ENSG00000143977 ortholog_one2one 12 retrogenes
Loxodonta africana ENSLAFG00000002301 ortholog_one2one 3 retrogenes
Microcebus murinus ENSMICG00000015369 ortholog_one2one 10 retrogenes
Myotis lucifugus ENSMLUG00000026490 possible_ortholog 3 retrogenes
Macaca mulatta ENSMMUG00000007961 possible_ortholog 3 retrogenes
Monodelphis domestica ENSMODG00000011528 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000007221 ortholog_one2one 2 retrogenes
Mus musculus ENSMUSG00000057278 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000010182 ortholog_one2one 1 retrogene
Oryctolagus cuniculus ENSOCUG00000011214 possible_ortholog 2 retrogenes
Otolemur garnettii ENSOGAG00000015300 ortholog_one2one 13 retrogenes
Pongo abelii ENSPPYG00000012324 ortholog_one2one 14 retrogenes
Pan troglodytes ENSPTRG00000012029 ortholog_one2one 11 retrogenes
Pteropus vampyrus ENSPVAG00000004855 ortholog_one2one 3 retrogenes
Rattus norvegicus ENSRNOG00000016507 ortholog_one2many 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000008654 ortholog_one2many 11 retrogenes
Tupaia belangeri ENSTBEG00000017381 possible_ortholog 66 retrogenes
Tarsius syrichta ENSTSYG00000005729 ortholog_one2one 11 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_145 78.67 98.68
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2. retro_cpor_531 60.26 97.37
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3. retro_cpor_573 72.37 96.05
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4. retro_cpor_673 72.97 96.05
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5. retro_cpor_843 67.61 90.79
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6. retro_cpor_1323 91.55 93.42
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Download FASTA sequences of all ENSCPOG00000025022 retrocopies