Parental gene:

ATP6V0C, ENSG00000185883

Aliases:ATP6V0C, ATP6C, ATP6L, ATPL, VATL, VPPC, Vma3
Description:ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c [Source:HGNC Symbol;Acc:855]
Organism:Human (Homo sapiens)
Coordinates:16:2563870..2570219(+)


>ENSG00000185883
ATGTCCGAGTCCAAGAGCGGCCCCGAGTATGCTTCGTTTTTCGCCGTCATGGGCGCCTCGGCCGCCATGGTCTTCAGCGC
CCTGGGCGCTGCCTATGGCACAGCCAAGAGCGGTACCGGCATTGCGGCCATGTCTGTCATGCGGCCGGAGCAGATCATGA
AGTCCATCATCCCAGTGGTCATGGCTGGCATCATCGCCATCTACGGCCTGGTGGTGGCAGTCCTCATCGCCAACTCCCTG
AATGACGACATCAGCCTCTACAAGAGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGCCTGAGCGGCCTGGCAGCCGG
CTTTGCCATCGGCATCGTGGGGGACGCTGGCGTGCGGGGCACCGCCCAGCAGCCCCGACTATTCGTGGGCATGATCCTGA
TTCTCATCTTCGCCGAGGTGCTCGGCCTCTACGGTCTCATCGTCGCCCTCATCCTCTCCACAAAGTAG

Library Parental gene expression (RPM)
bodymap2_liver 3 .84 RPM
bodymap2_lung 9 .07 RPM
bodymap2_breast 11 .98 RPM
bodymap2_adipose 14 .69 RPM
bodymap2_adrenal 11 .05 RPM
bodymap2_skeletal_muscle 8 .62 RPM
bodymap2_thyroid 19 .11 RPM
bodymap2_prostate 5 .06 RPM
bodymap2_colon 13 .15 RPM
bodymap2_testis 17 .89 RPM
bodymap2_brain 59 .58 RPM
bodymap2_heart 3 .51 RPM
bodymap2_white_blood_cells 13 .53 RPM
bodymap2_lymph_node 7 .71 RPM
bodymap2_ovary 11 .43 RPM
bodymap2_kidney 12 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000026428 ortholog_one2one 1 retrogene
retro_btau_1638,
Gorilla gorilla ENSGGOG00000028600 ortholog_one2one 2 retrogenes
retro_ggor_1323, retro_ggor_2335,
Macropus eugenii ENSMEUG00000004597 ortholog_one2one 2 retrogenes
retro_meug_1428, retro_meug_1837,
Myotis lucifugus ENSMLUG00000026715 ortholog_one2many 2 retrogenes
retro_mluc_2507, retro_mluc_294,
Monodelphis domestica ENSMODG00000015439 ortholog_one2one 5 retrogenes
retro_mdom_1669, retro_mdom_1739, retro_mdom_507, retro_mdom_84, retro_mdom_982,
Mus musculus ENSMUSG00000024121 ortholog_one2one 2 retrogenes
retro_mmus_2726, retro_mmus_2888,
Nomascus leucogenys ENSNLEG00000009416 ortholog_one2one 2 retrogenes
retro_nleu_1692, retro_nleu_2770,
Procavia capensis ENSPCAG00000015060 ortholog_one2one 1 retrogene
retro_pcap_148,
Pan troglodytes ENSPTRG00000007653 ortholog_one2one 2 retrogenes
retro_ptro_1204, retro_ptro_2346,
Rattus norvegicus ENSRNOG00000006542 ortholog_one2many 1 retrogene
retro_rnor_118,
Sarcophilus harrisii ENSSHAG00000014251 ortholog_one2one 1 retrogene
retro_shar_194,
Ictidomys tridecemlineatus ENSSTOG00000013420 ortholog_one2many 3 retrogenes
retro_itri_119, retro_itri_387, retro_itri_691,
Drosophila melanogaster FBgn0262736 ortholog_one2many 3 retrogenes
retro_dmel_3, retro_dmel_38, retro_dmel_65,
Caenorhabditis elegans R10E11.2 ortholog_one2many 2 retrogenes
retro_cele_1, retro_cele_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1798 75.54 89.03
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2. retro_hsap_3462 85.26 100.00
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Download FASTA sequences of all ENSG00000185883 retrocopies