Parental gene: | ATP6V0C, ENSMODG00000015439 |
| Aliases: | None |
| Description: | ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c [Source:HGNC Symbol;Acc:855] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 6:163561619..163570220(-) |
>ENSMODG00000015439
CCTTCAGTCCTTTACCCGCTACCCAGCCCCGTGCCCTTGCCTCTCTCCCCTCGTCCCGTCCACCTTCCGGCCTATCGACC
CCGCGCAGACATGTCCGAGGCTCCCGAATACGCGTCCTTCTTCGCCATCATGGGCGCCTCGGCCGCCATGGTCTTCAGCG
CTCTTGGTGCAGCTTATGGCACAGCAAAAAGTGGCACTGGTATCGCAGCCATGTCAGTCATGCGACCTGAGCTGATCATG
AAGTCAATCATTCCTGTCGTCATGGCTGGTATCATCGCTATTTATGGTCTGGTGGTGGCTGTTCTCATTGCCAATGCTGT
GACGCCAGCAATCACCCTATTCAAGAGCTTCCTTCAGCTGGGAGCAGGCCTCAGTGTGGGCCTCAGCGGGCTGGCAGCTG
GCTTTGCCATTGGCATTGTAGGTGATGCTGGTGTTCGGGGGACAGCGCAGCAGCCCCGACTATTCGTGGGGATGATCCTG
ATCCTGATCTTCGCTGAGGTGCTTGGCCTGTACGGTCTGATTGTGGCCCTCATTCTCTCTACAAAGTAG
CCTTCAGTCCTTTACCCGCTACCCAGCCCCGTGCCCTTGCCTCTCTCCCCTCGTCCCGTCCACCTTCCGGCCTATCGACC
CCGCGCAGACATGTCCGAGGCTCCCGAATACGCGTCCTTCTTCGCCATCATGGGCGCCTCGGCCGCCATGGTCTTCAGCG
CTCTTGGTGCAGCTTATGGCACAGCAAAAAGTGGCACTGGTATCGCAGCCATGTCAGTCATGCGACCTGAGCTGATCATG
AAGTCAATCATTCCTGTCGTCATGGCTGGTATCATCGCTATTTATGGTCTGGTGGTGGCTGTTCTCATTGCCAATGCTGT
GACGCCAGCAATCACCCTATTCAAGAGCTTCCTTCAGCTGGGAGCAGGCCTCAGTGTGGGCCTCAGCGGGCTGGCAGCTG
GCTTTGCCATTGGCATTGTAGGTGATGCTGGTGTTCGGGGGACAGCGCAGCAGCCCCGACTATTCGTGGGGATGATCCTG
ATCCTGATCTTCGCTGAGGTGCTTGGCCTGTACGGTCTGATTGTGGCCCTCATTCTCTCTACAAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000026428 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000185883 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028600 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004597 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000026715 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000024121 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009416 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000015060 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007653 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006542 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014251 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013420 | ortholog_one2many | 3 retrogenes | |
| Drosophila melanogaster | FBgn0262736 | ortholog_many2many | 3 retrogenes | |
| Caenorhabditis elegans | R10E11.2 | ortholog_many2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_84 | 85.53 | 83.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_507 | 54.35 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_982 | 54.49 | 88.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1669 | 98.43 | 69.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_1739 | 60.84 | 78.57 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000015439 retrocopies