Parental gene:

ATP6V0C, ENSPTRG00000007653

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:2581561..2587885(+)


>ENSPTRG00000007653
ATGTCCGAGTCCAAGAGCGGCCCCGAGTATGCTTCGTTTTTCGCCGTCATGGGCGCCTCGGCCGCCATGGTCTTCAGCGC
CCTGGGTGCTGCCTATGGCACAGCCAAGAGCGGTACCGGCATTGCGGCCATGTCTGTCATGCGGCCGGAGCTGATCATGA
AGTCCATCATCCCAGTGGTCATGGCTGGCATCATCGCCATCTACGGCCTGGTGGTGGCAGTCCTCATCGCCAACTCCCTG
AATGACGACATCAGCCTCTACAAGAGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGCCTGAGCGGCCTGGCAGCCGG
CTTTGCCATCGGCATCGTGGGGGACGCTGGCGTGCGGGGCACCGCCCAGCAGCCCCGACTATTCGTGGGCATGATCCTGA
TTCTCATCTTCGCCGAGGTGCTCGGCCTCTATGGTCTCATCGTCGCCCTCATCCTCTCCACAAAGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 326 .23 RPM
SRP007412_cerebellum 229 .43 RPM
SRP007412_heart 41 .88 RPM
SRP007412_kidney 231 .78 RPM
SRP007412_liver 107 .89 RPM
SRP007412_testis 34 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000026428 ortholog_one2one 1 retrogene
retro_btau_1638,
Homo sapiens ENSG00000185883 ortholog_one2one 2 retrogenes
retro_hsap_1798, retro_hsap_3462,
Gorilla gorilla ENSGGOG00000028600 ortholog_one2one 2 retrogenes
retro_ggor_1323, retro_ggor_2335,
Macropus eugenii ENSMEUG00000004597 ortholog_one2one 2 retrogenes
retro_meug_1428, retro_meug_1837,
Myotis lucifugus ENSMLUG00000026715 ortholog_one2many 2 retrogenes
retro_mluc_2507, retro_mluc_294,
Monodelphis domestica ENSMODG00000015439 ortholog_one2one 5 retrogenes
retro_mdom_1669, retro_mdom_1739, retro_mdom_507, retro_mdom_84, retro_mdom_982,
Mus musculus ENSMUSG00000024121 ortholog_one2one 2 retrogenes
retro_mmus_2726, retro_mmus_2888,
Nomascus leucogenys ENSNLEG00000009416 ortholog_one2one 2 retrogenes
retro_nleu_1692, retro_nleu_2770,
Procavia capensis ENSPCAG00000015060 ortholog_one2one 1 retrogene
retro_pcap_148,
Rattus norvegicus ENSRNOG00000006542 ortholog_one2many 1 retrogene
retro_rnor_118,
Sarcophilus harrisii ENSSHAG00000014251 ortholog_one2one 1 retrogene
retro_shar_194,
Ictidomys tridecemlineatus ENSSTOG00000013420 ortholog_one2many 3 retrogenes
retro_itri_119, retro_itri_387, retro_itri_691,
Drosophila melanogaster FBgn0262736 ortholog_one2many 3 retrogenes
retro_dmel_3, retro_dmel_38, retro_dmel_65,
Caenorhabditis elegans R10E11.2 ortholog_one2many 2 retrogenes
retro_cele_1, retro_cele_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1204 75.54 89.03
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2. retro_ptro_2346 82.69 100.00
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Download FASTA sequences of all ENSPTRG00000007653 retrocopies