RetrogeneDB ID: | retro_mluc_2507 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430638:79186..79650(-) | ||
Located in intron of: | ENSMLUG00000011845 | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000028007 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000026715 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.54 % |
Parental protein coverage: | 99.36 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SEVKSGGPEYASFFAVMGASAAMIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGL |
SEVKSGGPEYASFF.VMGASAAM.FS.L.AA..TAKSGTGIAAMSVMRPELIMKSI.PVV.AGIIAI..L | |
Retrocopy | SEVKSGGPEYASFFVVMGASAAMVFSTLAAAHSTAKSGTGIAAMSVMRPELIMKSIVPVVTAGIIAICFL |
Parental | VVAVLIANSLNEGISLYRSFLQLGAGLSVGLSGLAAGFAIGIV-GDAGVRGTAQQPRLFVGMILILIFAE |
VVAVLIA.SL.EGISLYRSFL.LGAGLSVGLSGLAAGFAIGIV.G..G..GTAQQP.LFV.MILILIFAE | |
Retrocopy | VVAVLIATSLSEGISLYRSFLPLGAGLSVGLSGLAAGFAIGIV<GGTGLWGTAQQPKLFVDMILILIFAE |
Parental | VLGLYGLIVALILSTK |
VLGLYGLI.ALILSTK | |
Retrocopy | VLGLYGLIAALILSTK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000026428 | 1 retrocopy | |
Homo sapiens | ENSG00000185883 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000028600 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000004597 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000026715 | 2 retrocopies |
retro_mluc_2507 , retro_mluc_294,
|
Monodelphis domestica | ENSMODG00000015439 | 5 retrocopies | |
Mus musculus | ENSMUSG00000024121 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000009416 | 2 retrocopies | |
Procavia capensis | ENSPCAG00000015060 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000007653 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000006542 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000014251 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000013420 | 3 retrocopies | |
Drosophila melanogaster | FBgn0262736 | 3 retrocopies | |
Caenorhabditis elegans | R10E11.2 | 2 retrocopies |