Parental gene: | TPI1, ENSNLEG00000004821 |
| Aliases: | None |
| Description: | triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:12009] |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397358.1:6794855..6812778(+) |
>ENSNLEG00000004821
ATGGCGGAGGACGGCGAGGAGGCGGAGTTCCACTTCGTGGCGCTCTATATAAGTGGGCAGCGGCCGCGGCTGCGCGCAGA
CACTGACCTTCAGCGCCTCGGCTCTAGCGCCATGGCGCCCTCCAGGAAGTTCTTCGTTGGGGGGAACTGGAAGATGAACG
GGCGGAAGCAGAGTCTGGGGGAGCTCATCGGCACTCTGAACGCGGCCAAGGTGCCGGCCGACACCGAGGTGGTTTGTGCT
CCCCCTACTGCCTATATCGACTTCGCCCGGCAGAAGCTGGATCCCAAGATTGCTGTGGCTGCGCAGAACTGCTACAAAGT
GACTAATGGGGCCTTTACTGGGGAGATCAGCCCTGGCATGATCAAAGACTGCGGAGCCACGTGGGTGGTCCTGGGGCACT
CAGAGAGAAGGCATGTCTTTGGGGAGTCAGATGAGCTGATTGGGCAGAAAGTGGCCCATGCTCTGGCAGAGGGACTCGGA
GTAATCGCCTGCATTGGGGAGAAGCTAGATGAAAGGGAAGCTGGCATCACTGAGAAGGTTGTTTTCGAGCAGACAAAGGT
CATCGCAGATAACGTGAAGGACTGGAGCAAGGTCGTCCTGGCCTATGAGCCTGTGTGGGCCATTGGTACTGGCAAGACTG
CAACACCGCAACAGGCCCAGGAAGTACATGAGAAGCTCCGAGGATGGCTTAAGTCCAATGTCTCTGATGCGGTGGCTCAG
AGCACCCGTATCATTTATGGAGGCTCTGTGACTGGGGCAACCTGCAAGGAGCTGGCCAGCCAGCCTGACGTGGATGGCTT
CCTGGTAGCGGATGCGGACCTGGCACTGGCCCCAGACAGCGCTTACTGCCGGATAGAGGGTCCTGCCCTTCAGTCCGCGG
AATGCTGGCCCCAGGGACATTTTATTCAGAAATTAAACCATTCAGAGTTCCAGCACTGTCGGGGGTCATCGGGCTCTGTC
CACCACCATAGGCCTAGCATTGTCACCAGCGGAGCTATGGAGGGACCTCGGCCCAAGCTGGGGCCTCTTCATCATCAAAG
AAGGCTTCTGGCCAGACCAGGCTCTGTGGGCGCGGCCAGGCTGGAGGACTAG
ATGGCGGAGGACGGCGAGGAGGCGGAGTTCCACTTCGTGGCGCTCTATATAAGTGGGCAGCGGCCGCGGCTGCGCGCAGA
CACTGACCTTCAGCGCCTCGGCTCTAGCGCCATGGCGCCCTCCAGGAAGTTCTTCGTTGGGGGGAACTGGAAGATGAACG
GGCGGAAGCAGAGTCTGGGGGAGCTCATCGGCACTCTGAACGCGGCCAAGGTGCCGGCCGACACCGAGGTGGTTTGTGCT
CCCCCTACTGCCTATATCGACTTCGCCCGGCAGAAGCTGGATCCCAAGATTGCTGTGGCTGCGCAGAACTGCTACAAAGT
GACTAATGGGGCCTTTACTGGGGAGATCAGCCCTGGCATGATCAAAGACTGCGGAGCCACGTGGGTGGTCCTGGGGCACT
CAGAGAGAAGGCATGTCTTTGGGGAGTCAGATGAGCTGATTGGGCAGAAAGTGGCCCATGCTCTGGCAGAGGGACTCGGA
GTAATCGCCTGCATTGGGGAGAAGCTAGATGAAAGGGAAGCTGGCATCACTGAGAAGGTTGTTTTCGAGCAGACAAAGGT
CATCGCAGATAACGTGAAGGACTGGAGCAAGGTCGTCCTGGCCTATGAGCCTGTGTGGGCCATTGGTACTGGCAAGACTG
CAACACCGCAACAGGCCCAGGAAGTACATGAGAAGCTCCGAGGATGGCTTAAGTCCAATGTCTCTGATGCGGTGGCTCAG
AGCACCCGTATCATTTATGGAGGCTCTGTGACTGGGGCAACCTGCAAGGAGCTGGCCAGCCAGCCTGACGTGGATGGCTT
CCTGGTAGCGGATGCGGACCTGGCACTGGCCCCAGACAGCGCTTACTGCCGGATAGAGGGTCCTGCCCTTCAGTCCGCGG
AATGCTGGCCCCAGGGACATTTTATTCAGAAATTAAACCATTCAGAGTTCCAGCACTGTCGGGGGTCATCGGGCTCTGTC
CACCACCATAGGCCTAGCATTGTCACCAGCGGAGCTATGGAGGGACCTCGGCCCAAGCTGGGGCCTCTTCATCATCAAAG
AAGGCTTCTGGCCAGACCAGGCTCTGTGGGCGCGGCCAGGCTGGAGGACTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007348 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000111669 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000002623 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006977 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000024989 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000005194 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000016774 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000023456 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000031254 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004207 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004595 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000015290 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000050669 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_847 | 79.60 | 68.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_1120 | 81.57 | 69.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000004821 retrocopies