RetrogeneDB ID: | retro_ogar_109 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873569.1:6332037..6332787(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000033725 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000031254 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 97.98 % |
Parental protein coverage: | 99.2 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAPSRKFFVGGNWKMNGRKKCLGELVSTLNAAKVPSDTEVVCAPPTAYIDFTRQKLDPKIAVSAQNCYKV |
MAPSRKFFVGGNWKMNGRKKCLGELVSTLNAAKVPSDTEVVCAPPTAYIDFTRQKLDPKIAVSAQNCYKV | |
Retrocopy | MAPSRKFFVGGNWKMNGRKKCLGELVSTLNAAKVPSDTEVVCAPPTAYIDFTRQKLDPKIAVSAQNCYKV |
Parental | TNGAFTGEISPGMIKDCGATWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGIT |
TNGAFTGEISPGMIKDCGATWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACI.EKLDEREAGIT | |
Retrocopy | TNGAFTGEISPGMIKDCGATWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIREKLDEREAGIT |
Parental | EKVVFEQTKVIADNVKDWNKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYG |
EKVVFEQTKVIADNVKDWNKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYG | |
Retrocopy | EKVVFEQTKVIADNVKDWNKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYG |
Parental | GSVTGANCKELASQPDVDGFLVGGASLKPEFVMEVQA |
GSVTGANCKELASQPDVDGFLVGGASLKPEFV....A | |
Retrocopy | GSVTGANCKELASQPDVDGFLVGGASLKPEFVDIINA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000007348 | 2 retrocopies | |
Homo sapiens | ENSG00000111669 | 3 retrocopies | |
Gorilla gorilla | ENSGGOG00000002623 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000006977 | 5 retrocopies | |
Myotis lucifugus | ENSMLUG00000024989 | 4 retrocopies | |
Macaca mulatta | ENSMMUG00000005194 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000016774 | 1 retrocopy | |
Mus musculus | ENSMUSG00000023456 | 4 retrocopies | |
Nomascus leucogenys | ENSNLEG00000004821 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000031254 | 1 retrocopy |
retro_ogar_109 ,
|
Pongo abelii | ENSPPYG00000004207 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000004595 | 4 retrocopies | |
Rattus norvegicus | ENSRNOG00000015290 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000050669 | 2 retrocopies |